Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0142
         (770 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0133 + 895107-895280,895960-896271,896815-897081,897161-89...    31   1.0  
07_01_0677 + 5087584-5087589,5088890-5089172,5093561-5093704,509...    30   1.8  
11_06_0754 - 26935647-26937780,26940890-26941827                       29   4.1  
01_01_0195 + 1697447-1697691,1698150-1698808,1699754-1701570,170...    29   4.1  
01_06_1562 - 38268514-38268902,38269310-38269451,38269517-382698...    28   7.2  
12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,340...    28   9.5  

>05_01_0133 +
           895107-895280,895960-896271,896815-897081,897161-897265
          Length = 285

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = -3

Query: 396 HG*TDVIFTQTFFRTILNHLIHQAVQQTLSGTRVGVCTRPILVAHIQVWSV 244
           HG + V    +FF++I N L+ + V   L   R GV   P + AH Q  SV
Sbjct: 213 HGASGVSVEGSFFQSIFNGLLKEGV--VLGSVRAGVQWTPAVFAHAQKESV 261


>07_01_0677 +
           5087584-5087589,5088890-5089172,5093561-5093704,
           5094167-5095269
          Length = 511

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 636 VVLCSCFSCAYRGPMRVDLEYRRKAHILATCSC 538
           + +  CF  A+R P++ +LE+ R  H+L   +C
Sbjct: 427 ITVVFCFIWAWRDPVKFNLEHLRWVHMLTVIAC 459


>11_06_0754 - 26935647-26937780,26940890-26941827
          Length = 1023

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = +2

Query: 101 TPYLRKSRLCHQWSCINTKLGFPESLPPREQSAVVLSRILPDGAWRNLTDHTWMCATRIG 280
           T  L KSR   QW  +N  LG+     P  +    + ++L D ++ NL++H   C   + 
Sbjct: 416 TSILEKSRKMEQWGYVNKSLGYNLMKNPTLEG---IKQVL-DLSYNNLSEHLKPCVLYLS 471

Query: 281 L 283
           +
Sbjct: 472 I 472


>01_01_0195 +
           1697447-1697691,1698150-1698808,1699754-1701570,
           1701700-1701771
          Length = 930

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 179 PPREQSAVVLSRILPDGAWRNLTDHTWMCATR 274
           P  EQ A  +S + P G+W NL D T +  +R
Sbjct: 709 PVLEQGATSVSAMFPPGSWYNLFDTTKVVVSR 740


>01_06_1562 -
           38268514-38268902,38269310-38269451,38269517-38269865,
           38270848-38271107
          Length = 379

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -2

Query: 754 SSLGDPRFVISTSGVCTSGRRTTFYG 677
           S  GD R VI  SGVCT  R T  +G
Sbjct: 54  SMAGDDRMVIVGSGVCTGWRDTLEWG 79


>12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,
            3404071-3404562,3404718-3404821,3404913-3404994,
            3405085-3405441,3405532-3406089,3406376-3406479,
            3406575-3406650,3406764-3406898,3407192-3407494,
            3407581-3408345,3409459-3412591,3412763-3412882
          Length = 2445

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = +1

Query: 358  EESLRKDDVCSPVSSLSGFNYMFSQSMYEDLEEH---LPVEIRPE 483
            E+S + DD+C  +S++ G + + S    ED  EH   L +EI  E
Sbjct: 1097 EKSNQGDDLCKNLSTVKGESPLASNFHVEDAAEHGSMLQIEINAE 1141


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,450,210
Number of Sequences: 37544
Number of extensions: 529575
Number of successful extensions: 1187
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)