Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0142
         (770 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein...    29   2.8  
Z69361-3|CAA93289.1|  533|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z68882-20|CAA93112.1|  533|Caenorhabditis elegans Hypothetical p...    28   6.4  
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ...    28   6.4  
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr...    28   8.5  
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr...    28   8.5  
AL034488-14|CAE11311.1|  341|Caenorhabditis elegans Hypothetical...    28   8.5  
AF003137-8|AAB93645.3|  494|Caenorhabditis elegans Hypothetical ...    28   8.5  

>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
            C10C6.1 protein.
          Length = 1565

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -2

Query: 349  SQSSDTSGSAADPVRDTCWCMYEAYSRSTHPGMVSQIPP 233
            S SS  S  +A+P R+TC+ MY +   ST  G  SQ+ P
Sbjct: 1089 SISSSQSSQSAEPARETCYVMYPS-GPSTSVG--SQLSP 1124


>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
            protein.
          Length = 1565

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -2

Query: 349  SQSSDTSGSAADPVRDTCWCMYEAYSRSTHPGMVSQIPP 233
            S SS  S  +A+P R+TC+ MY +   ST  G  SQ+ P
Sbjct: 1089 SISSSQSSQSAEPARETCYVMYPS-GPSTSVG--SQLSP 1124


>Z69361-3|CAA93289.1|  533|Caenorhabditis elegans Hypothetical
           protein T13H10.1 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/52 (21%), Positives = 26/52 (50%)
 Frame = +1

Query: 316 LLHCLMYQMIENCPEESLRKDDVCSPVSSLSGFNYMFSQSMYEDLEEHLPVE 471
           ++  + Y++     EE +   +    + +L GF+     + Y +L +H+P+E
Sbjct: 350 IVRFITYRICAGAEEERVTMSEAVRELLTLEGFDQAPGSNSYFELPDHIPME 401


>Z68882-20|CAA93112.1|  533|Caenorhabditis elegans Hypothetical
           protein T13H10.1 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/52 (21%), Positives = 26/52 (50%)
 Frame = +1

Query: 316 LLHCLMYQMIENCPEESLRKDDVCSPVSSLSGFNYMFSQSMYEDLEEHLPVE 471
           ++  + Y++     EE +   +    + +L GF+     + Y +L +H+P+E
Sbjct: 350 IVRFITYRICAGAEEERVTMSEAVRELLTLEGFDQAPGSNSYFELPDHIPME 401


>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
           protein Y18D10A.1 protein.
          Length = 1634

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = -2

Query: 361 LPDNSQSSDTSGSAADPVRD 302
           LP +SQ+  TSGSAA PV D
Sbjct: 823 LPTSSQTPPTSGSAAPPVDD 842


>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
           protein T12D8.1 protein.
          Length = 2561

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 304 DTCWCMYEAYSRSTHPGMVSQIPPSSIR 221
           DT WC Y A  +  H  + S+  PS+++
Sbjct: 704 DTVWCDYVALDKDAHEILKSKYTPSALK 731


>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
           protein T12D8.1 protein.
          Length = 2561

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 304 DTCWCMYEAYSRSTHPGMVSQIPPSSIR 221
           DT WC Y A  +  H  + S+  PS+++
Sbjct: 704 DTVWCDYVALDKDAHEILKSKYTPSALK 731


>AL034488-14|CAE11311.1|  341|Caenorhabditis elegans Hypothetical
           protein Y54G11A.15 protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/55 (21%), Positives = 27/55 (49%)
 Frame = +3

Query: 18  SRMFFSKTWVCSGYFSYLIWHWCKLSSAHLT*ENLDCVTNGVALIRSWVFRSLCL 182
           +R+F    ++     + +IW +C   + HL  +N   +++G   +    F S+C+
Sbjct: 194 ARLFNPHMYIACALLTSMIWFYCSHIAWHLLPKNNPSMSSGTRKMLKNFFISMCI 248


>AF003137-8|AAB93645.3|  494|Caenorhabditis elegans Hypothetical
           protein C27A12.8 protein.
          Length = 494

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 407 LDSITCSHKVCTKIWRSIYLLKFVLN 484
           L  ++C+H+ CT+ W++ YL   + N
Sbjct: 137 LSGLSCNHRACTQCWKA-YLTNKIAN 161


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,949,041
Number of Sequences: 27780
Number of extensions: 459307
Number of successful extensions: 1077
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)