Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0141
(777 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g14870.1 68418.m01744 cyclic nucleotide-regulated ion channel... 31 0.64
At4g22620.1 68417.m03262 auxin-responsive family protein auxin-i... 31 1.1
At1g15350.3 68414.m01836 expressed protein 30 1.5
At1g15350.2 68414.m01838 expressed protein 30 1.5
At1g15350.1 68414.m01837 expressed protein 30 1.5
At1g67170.1 68414.m07641 expressed protein similar to enterophil... 29 2.6
At3g48010.1 68416.m05234 cyclic nucleotide-regulated ion channel... 29 3.4
At1g61770.1 68414.m06966 DNAJ heat shock N-terminal domain-conta... 29 3.4
At3g19190.1 68416.m02436 expressed protein 29 4.5
At1g11360.2 68414.m01305 universal stress protein (USP) family p... 28 6.0
At1g11360.1 68414.m01304 universal stress protein (USP) family p... 28 6.0
At5g07570.1 68418.m00867 glycine/proline-rich protein contains s... 28 7.9
At5g03360.1 68418.m00289 DC1 domain-containing protein contains ... 28 7.9
At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containi... 28 7.9
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 28 7.9
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 28 7.9
At2g24610.1 68415.m02940 cyclic nucleotide-regulated ion channel... 28 7.9
>At5g14870.1 68418.m01744 cyclic nucleotide-regulated ion channel,
putative (CNGC18) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc6) GI:4581207 from
[Arabidopsis thaliana]
Length = 706
Score = 31.5 bits (68), Expect = 0.64
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 190 FVYYSGWWWSWGRLFLLDMWSRFK 119
F YYS W +WG F+ W R+K
Sbjct: 577 FRYYSHQWRAWGACFVQSAWRRYK 600
>At4g22620.1 68417.m03262 auxin-responsive family protein
auxin-induced protein 10A, Glycine max., PIR2:JQ1099
Length = 160
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -2
Query: 479 VASEPKLSTLKPSLLDLVVNVGELGGEDRSIKAPVCIFFGSHFGNIL 339
+ +EPK T+ LVV+VGE G + R + PV F FG +L
Sbjct: 70 LGNEPKTPTVPRG--HLVVHVGESGEDTRRVVVPVIYFNHPLFGELL 114
>At1g15350.3 68414.m01836 expressed protein
Length = 108
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 259 RKNRPVN-NQNIKLQGIVSDFECELDSNKMFPKCEPKNIQTGALIDL 396
+ N PV+ NQ KL + ++ L SNK+FP+ P L+D+
Sbjct: 54 KPNNPVDHNQGAKLNWNTATYDSLLGSNKLFPQPIPLTEMVDFLVDI 100
>At1g15350.2 68414.m01838 expressed protein
Length = 154
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 259 RKNRPVN-NQNIKLQGIVSDFECELDSNKMFPKCEPKNIQTGALIDL 396
+ N PV+ NQ KL + ++ L SNK+FP+ P L+D+
Sbjct: 100 KPNNPVDHNQGAKLNWNTATYDSLLGSNKLFPQPIPLTEMVDFLVDI 146
>At1g15350.1 68414.m01837 expressed protein
Length = 154
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 259 RKNRPVN-NQNIKLQGIVSDFECELDSNKMFPKCEPKNIQTGALIDL 396
+ N PV+ NQ KL + ++ L SNK+FP+ P L+D+
Sbjct: 100 KPNNPVDHNQGAKLNWNTATYDSLLGSNKLFPQPIPLTEMVDFLVDI 146
>At1g67170.1 68414.m07641 expressed protein similar to
enterophilin-2L (GI:12718845) [Cavia porcellus]; similar
to Hyaluronan mediated motility receptor (Intracellular
hyaluronic acid binding protein) (Receptor for
hyaluronan-mediated motility) (CD168 antigen)
(Swiss-Prot:O75330) [Homo sapiens]
Length = 359
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2
Query: 29 PTRPAPNVPVNGVHRYCPTTNWDNDPFGDVFEPTP 133
P RP N P Y PTT P+G F P P
Sbjct: 309 PQRPGYNFPRGPPGSYDPTTRLPTGPYGAPFPPGP 343
>At3g48010.1 68416.m05234 cyclic nucleotide-regulated ion channel,
putative (CNGC16) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc6) GI:4581207 from
[Arabidopsis thaliana]
Length = 705
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 190 FVYYSGWWWSWGRLFLLDMWSRF 122
F YYS W +WG F+ W R+
Sbjct: 585 FRYYSHQWRAWGTCFIQAAWRRY 607
>At1g61770.1 68414.m06966 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9UBS4 DnaJ
homolog subfamily B member 11 precursor Homo sapiens;
contains Pfam profile PF00226 DnaJ domain
Length = 300
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -3
Query: 199 IRLFVYYSGWWWSWGRLFLLDMWSRFKHITKR-IIIPISSW 80
I+L V+YS W W + W ++T+R + +P +W
Sbjct: 223 IKLLVWYSSWVWRYKVKKAPYSWEDASYLTRRSLSVPADAW 263
>At3g19190.1 68416.m02436 expressed protein
Length = 1861
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 460 SFGSDATTSTSHQNALTETPHKPKVVL 540
SFGSD S SH + LT++P P V+
Sbjct: 329 SFGSDCFPSVSHSDFLTDSPTIPTNVM 355
>At1g11360.2 68414.m01305 universal stress protein (USP) family
protein contains Pfam PF00582: universal stress protein
family domain; similar to ethylene-responsive ER6
protein (GI:5669654) [Lycopersicon esculentum]
Length = 242
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 NSSQAESGFEDDFDLFMNTRKNDTVDDMTVID-PFSPQPAKPLIMKK 650
N+ +++ EDDFD+ N + +D + D PF K MK+
Sbjct: 96 NNEESQRKLEDDFDIVTNKKASDVAQPLVEADIPFKIHIVKDHDMKE 142
>At1g11360.1 68414.m01304 universal stress protein (USP) family
protein contains Pfam PF00582: universal stress protein
family domain; similar to ethylene-responsive ER6
protein (GI:5669654) [Lycopersicon esculentum]
Length = 242
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 NSSQAESGFEDDFDLFMNTRKNDTVDDMTVID-PFSPQPAKPLIMKK 650
N+ +++ EDDFD+ N + +D + D PF K MK+
Sbjct: 96 NNEESQRKLEDDFDIVTNKKASDVAQPLVEADIPFKIHIVKDHDMKE 142
>At5g07570.1 68418.m00867 glycine/proline-rich protein contains
similarity to flagelliform silk protein [Nephila
clavipes] gi|7106224|gb|AAF36090
Length = 1504
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = +3
Query: 411 FSYIYYKV*QRWF---KCGQLWFRCY 479
FS++++ RWF CG+ WFRC+
Sbjct: 19 FSFLWFS---RWFCCGLCGRFWFRCW 41
>At5g03360.1 68418.m00289 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 1610
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 60 MECTATVQ-LLIGIMIRLVMCLNLLHMSRRKSLPQDHHHP 176
MEC A V+ + G + C +LH + +LP+ HHHP
Sbjct: 434 MECQACVRPIYFGNFYSCMQCDFILHEACA-NLPRRHHHP 472
>At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1184
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -3
Query: 139 DMWSRFKHITKRIIIPISSWTVAVHSIHR--HVRGRSSRAL 23
D+WS + T + +S+WT+ +H+++ HV+ S L
Sbjct: 505 DVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCL 545
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 692 NLHAQVPSLXRSNXYSGASPPRPKPP 769
NL + P+ R N YS + PPRP P
Sbjct: 74 NLVFRPPTPDRPNPYSASPPPRPASP 99
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 692 NLHAQVPSLXRSNXYSGASPPRPKPP 769
NL + P+ R N YS + PPRP P
Sbjct: 73 NLVFRPPTPDRPNPYSASPPPRPASP 98
>At2g24610.1 68415.m02940 cyclic nucleotide-regulated ion channel,
putative (CNGC14) similar to cyclic nucleotide and
calmodulin-regulated ion channel (GI:4581205)
[Arabidopsis thaliana]
Length = 726
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 190 FVYYSGWWWSWGRLFLLDMWSRFK 119
F YYS W +W F+ W R+K
Sbjct: 609 FRYYSHQWRTWAACFVQVAWRRYK 632
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,245,652
Number of Sequences: 28952
Number of extensions: 366916
Number of successful extensions: 934
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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