Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0140
         (637 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_3577| Best HMM Match : No HMM Matches (HMM E-Value=.)              161   4e-40
SB_46444| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_17219| Best HMM Match : Put_Phosphatase (HMM E-Value=5.7)           29   4.2  
SB_10537| Best HMM Match : CTP_transf_2 (HMM E-Value=0)                28   7.3  
SB_2086| Best HMM Match : 7tm_1 (HMM E-Value=9.1e-07)                  28   7.3  

>SB_3577| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1164

 Score =  161 bits (391), Expect = 4e-40
 Identities = 81/100 (81%), Positives = 90/100 (90%)
 Frame = +1

Query: 337  SADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIQARV 516
            +ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNI++RV
Sbjct: 784  AADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRV 843

Query: 517  NRLSVLGAITSVQHRLQAVY*SGHQTGLVIYCGTIVTEEG 636
            NRLSVL AITSVQ RL+ +Y      GLV+YCGTIVT++G
Sbjct: 844  NRLSVLSAITSVQQRLK-LYSKVPPNGLVVYCGTIVTDDG 882


>SB_46444| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 725

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +1

Query: 328 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKD 447
           +ES+AD   E W+I+KL+K L+   GN T+ I  +   +D
Sbjct: 150 QESNADLPSEYWQIQKLVKYLK--GGNQTATIIALCAMRD 187


>SB_17219| Best HMM Match : Put_Phosphatase (HMM E-Value=5.7)
          Length = 500

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/27 (48%), Positives = 21/27 (77%)
 Frame = +1

Query: 301 LNKKRNKMSEESSADRNVEIWKIKKLI 381
           L +K++ MSE S+ DR+VE W++K +I
Sbjct: 107 LKRKKDVMSE-SAIDRSVEEWELKNVI 132


>SB_10537| Best HMM Match : CTP_transf_2 (HMM E-Value=0)
          Length = 816

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +1

Query: 85  KKKSPSNRRRKCKLESVIGVARCLVRPVQTRLGQFE 192
           KKK+   R+  C    ++ +  C  RP+ +R+ ++E
Sbjct: 720 KKKTNVERKNICVNHDIVYIVICSGRPIDSRINKYE 755


>SB_2086| Best HMM Match : 7tm_1 (HMM E-Value=9.1e-07)
          Length = 827

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 507 STCESSLSA-WRNYFCTAPTSSCILKWPPNGPSY 605
           +T   SLS  W  Y   +  + C + WPP+G SY
Sbjct: 669 TTMSYSLSLLWSKYVFISRKAFCQVDWPPSGLSY 702


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,375,085
Number of Sequences: 59808
Number of extensions: 419069
Number of successful extensions: 1035
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)