Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0140
         (637 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X81625-1|CAA57281.1|  437|Homo sapiens C11 protein protein.           168   2e-41
U90176-1|AAB49726.1|  437|Homo sapiens eukaryotic release factor...   168   2e-41
BC088358-1|AAH88358.1|  437|Homo sapiens eukaryotic translation ...   168   2e-41
AF095901-1|AAD43966.1|  437|Homo sapiens eRF1 protein.                168   2e-41
M75715-1|AAA36665.1|  428|Homo sapiens TB3-1 protein.                 165   9e-41
BT007374-1|AAP36038.1|  404|Homo sapiens eukaryotic translation ...   115   1e-25
BC014269-1|AAH14269.1|  404|Homo sapiens ETF1 protein protein.        115   1e-25

>X81625-1|CAA57281.1|  437|Homo sapiens C11 protein protein.
          Length = 437

 Score =  168 bits (408), Expect = 2e-41
 Identities = 85/103 (82%), Positives = 93/103 (90%)
 Frame = +1

Query: 328 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIQ 507
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNI+
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 508 ARVNRLSVLGAITSVQHRLQAVY*SGHQTGLVIYCGTIVTEEG 636
           +RVNRLSVLGAITSVQ RL+ +Y      GLV+YCGTIVTEEG
Sbjct: 64  SRVNRLSVLGAITSVQQRLK-LYNKVPPNGLVVYCGTIVTEEG 105


>U90176-1|AAB49726.1|  437|Homo sapiens eukaryotic release factor 1
           protein.
          Length = 437

 Score =  168 bits (408), Expect = 2e-41
 Identities = 85/103 (82%), Positives = 93/103 (90%)
 Frame = +1

Query: 328 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIQ 507
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNI+
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 508 ARVNRLSVLGAITSVQHRLQAVY*SGHQTGLVIYCGTIVTEEG 636
           +RVNRLSVLGAITSVQ RL+ +Y      GLV+YCGTIVTEEG
Sbjct: 64  SRVNRLSVLGAITSVQQRLK-LYNKVPPNGLVVYCGTIVTEEG 105


>BC088358-1|AAH88358.1|  437|Homo sapiens eukaryotic translation
           termination factor 1 protein.
          Length = 437

 Score =  168 bits (408), Expect = 2e-41
 Identities = 85/103 (82%), Positives = 93/103 (90%)
 Frame = +1

Query: 328 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIQ 507
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNI+
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 508 ARVNRLSVLGAITSVQHRLQAVY*SGHQTGLVIYCGTIVTEEG 636
           +RVNRLSVLGAITSVQ RL+ +Y      GLV+YCGTIVTEEG
Sbjct: 64  SRVNRLSVLGAITSVQQRLK-LYNKVPPNGLVVYCGTIVTEEG 105


>AF095901-1|AAD43966.1|  437|Homo sapiens eRF1 protein.
          Length = 437

 Score =  168 bits (408), Expect = 2e-41
 Identities = 85/103 (82%), Positives = 93/103 (90%)
 Frame = +1

Query: 328 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIQ 507
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNI+
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 508 ARVNRLSVLGAITSVQHRLQAVY*SGHQTGLVIYCGTIVTEEG 636
           +RVNRLSVLGAITSVQ RL+ +Y      GLV+YCGTIVTEEG
Sbjct: 64  SRVNRLSVLGAITSVQQRLK-LYNKVPPNGLVVYCGTIVTEEG 105


>M75715-1|AAA36665.1|  428|Homo sapiens TB3-1 protein.
          Length = 428

 Score =  165 bits (402), Expect = 9e-41
 Identities = 84/103 (81%), Positives = 92/103 (89%)
 Frame = +1

Query: 328 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIQ 507
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNI+
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 508 ARVNRLSVLGAITSVQHRLQAVY*SGHQTGLVIYCGTIVTEEG 636
           +RVNRLSVLGAITSVQ RL+ +Y      GL +YCGTIVTEEG
Sbjct: 64  SRVNRLSVLGAITSVQQRLK-LYNKVPPNGLEVYCGTIVTEEG 105


>BT007374-1|AAP36038.1|  404|Homo sapiens eukaryotic translation
           termination factor 1 protein.
          Length = 404

 Score =  115 bits (277), Expect = 1e-25
 Identities = 59/73 (80%), Positives = 65/73 (89%)
 Frame = +1

Query: 418 MISLIIPPKDQISRVSKMLADEFGTASNIQARVNRLSVLGAITSVQHRLQAVY*SGHQTG 597
           MISLIIPPKDQISRV+KMLADEFGTASNI++RVNRLSVLGAITSVQ RL+ +Y      G
Sbjct: 1   MISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLK-LYNKVPPNG 59

Query: 598 LVIYCGTIVTEEG 636
           LV+YCGTIVTEEG
Sbjct: 60  LVVYCGTIVTEEG 72


>BC014269-1|AAH14269.1|  404|Homo sapiens ETF1 protein protein.
          Length = 404

 Score =  115 bits (277), Expect = 1e-25
 Identities = 59/73 (80%), Positives = 65/73 (89%)
 Frame = +1

Query: 418 MISLIIPPKDQISRVSKMLADEFGTASNIQARVNRLSVLGAITSVQHRLQAVY*SGHQTG 597
           MISLIIPPKDQISRV+KMLADEFGTASNI++RVNRLSVLGAITSVQ RL+ +Y      G
Sbjct: 1   MISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLK-LYNKVPPNG 59

Query: 598 LVIYCGTIVTEEG 636
           LV+YCGTIVTEEG
Sbjct: 60  LVVYCGTIVTEEG 72


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,623,408
Number of Sequences: 237096
Number of extensions: 1881843
Number of successful extensions: 3683
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3676
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)