Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0139
         (614 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    24   0.88 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   8.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   8.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   8.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.2  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -3

Query: 228 PHV--SPSHCRPCLHPEIAWQMQPRHTSVTGGSSETSAKQTPAT 103
           PH+  SP++ +P LH        P   S T  +S  S+  +PA+
Sbjct: 180 PHLRDSPNYIKPQLHVSTGSTSSPTIASATYTNSANSSIWSPAS 223


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 373 FGQDCNGDGVVN 408
           FGQD N DGV+N
Sbjct: 434 FGQDLNQDGVMN 445


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 373 FGQDCNGDGVVN 408
           FGQD N DGV+N
Sbjct: 434 FGQDLNQDGVMN 445


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 164 GCICQAISGCKQGLQCEGET 223
           G  C  ISG  +   C G+T
Sbjct: 440 GSYCDVISGNAENGSCSGKT 459


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 164 GCICQAISGCKQGLQCEGET 223
           G  C  ISG  +   C G+T
Sbjct: 441 GSYCDVISGNAENGSCSGKT 460


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 164 GCICQAISGCKQGLQCEGET 223
           G  C  ISG  +   C G+T
Sbjct: 441 GSYCDVISGNAENGSCSGKT 460


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = +2

Query: 77   VIRFCALLLVAGVCFADVSELPPVTEVCLGCICQAISGC 193
            V+  C  L + G C  + +    +  V    I   +SGC
Sbjct: 1127 VLLNCVYLFLCGFCVYEFASDERIKLVIKAIIIMILSGC 1165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,205
Number of Sequences: 336
Number of extensions: 3303
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)