Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0138
         (756 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93378-5|CAB07584.3| 1229|Caenorhabditis elegans Hypothetical pr...    51   8e-07
AJ811574-1|CAH18872.1| 1229|Caenorhabditis elegans putative treh...    51   8e-07
AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans trehalose-6-p...    51   8e-07
U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose 6-pho...    46   2e-05
U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose 6-pho...    46   2e-05
AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative treh...    46   2e-05
AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans trehalose-6-p...    46   2e-05
Z78417-12|CAO78731.1|  318|Caenorhabditis elegans Hypothetical p...    29   3.6  
Z78417-11|CAE17739.1|  294|Caenorhabditis elegans Hypothetical p...    29   3.6  
U37430-2|AAL08045.2|  802|Caenorhabditis elegans Hypothetical pr...    29   4.7  

>Z93378-5|CAB07584.3| 1229|Caenorhabditis elegans Hypothetical
           protein F19H8.1 protein.
          Length = 1229

 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = +2

Query: 254 LADHWKAYIKINEEFAEKTVHALHLLNKQKKDKNGSPPIVWVHDYHLMLAANWIRQRAEE 433
           L  HW AY+++N +FA   V      N + +D       +W+HDYHLML    I Q  ++
Sbjct: 411 LRAHWCAYVRVNYQFAIDAVR-----NSRPQD------FIWIHDYHLML-VGMIMQSLDQ 458

Query: 434 DEIKCKLAFFLHIPF-PPWDIF 496
                ++ FFLHIPF PP + F
Sbjct: 459 ---HLEVGFFLHIPFQPPGEFF 477



 Score = 34.3 bits (75), Expect = 0.095
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 144 KIVPIRAEPKLFDSYYNGCCNGTFWPLFHSMPD 242
           K+ P+  +   ++ YY G  NG  WP  H++P+
Sbjct: 367 KLNPVVVQEDDYNVYYGGISNGLLWPALHNLPE 399


>AJ811574-1|CAH18872.1| 1229|Caenorhabditis elegans putative
           trehalose 6-phosphatesynthase protein.
          Length = 1229

 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = +2

Query: 254 LADHWKAYIKINEEFAEKTVHALHLLNKQKKDKNGSPPIVWVHDYHLMLAANWIRQRAEE 433
           L  HW AY+++N +FA   V      N + +D       +W+HDYHLML    I Q  ++
Sbjct: 411 LRAHWCAYVRVNYQFAIDAVR-----NSRPQD------FIWIHDYHLML-VGMIMQSLDQ 458

Query: 434 DEIKCKLAFFLHIPF-PPWDIF 496
                ++ FFLHIPF PP + F
Sbjct: 459 ---HLEVGFFLHIPFQPPGEFF 477



 Score = 34.3 bits (75), Expect = 0.095
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 144 KIVPIRAEPKLFDSYYNGCCNGTFWPLFHSMPD 242
           K+ P+  +   ++ YY G  NG  WP  H++P+
Sbjct: 367 KLNPVVVQEDDYNVYYGGISNGLLWPALHNLPE 399


>AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans
           trehalose-6-phosphate synthase protein.
          Length = 1230

 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = +2

Query: 254 LADHWKAYIKINEEFAEKTVHALHLLNKQKKDKNGSPPIVWVHDYHLMLAANWIRQRAEE 433
           L  HW AY+++N +FA   V      N + +D       +W+HDYHLML    I Q  ++
Sbjct: 411 LRAHWCAYVRVNYQFAIDAVR-----NSRPQD------FIWIHDYHLML-VGMIMQSLDQ 458

Query: 434 DEIKCKLAFFLHIPF-PPWDIF 496
                ++ FFLHIPF PP + F
Sbjct: 459 ---HLEVGFFLHIPFQPPGEFF 477



 Score = 34.3 bits (75), Expect = 0.095
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 144 KIVPIRAEPKLFDSYYNGCCNGTFWPLFHSMPD 242
           K+ P+  +   ++ YY G  NG  WP  H++P+
Sbjct: 367 KLNPVVVQEDDYNVYYGGISNGLLWPALHNLPE 399


>U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose
           6-phosphate synthaseprotein 1, isoform b protein.
          Length = 1294

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 27/77 (35%), Positives = 40/77 (51%)
 Frame = +2

Query: 254 LADHWKAYIKINEEFAEKTVHALHLLNKQKKDKNGSPPIVWVHDYHLMLAANWIRQRAEE 433
           L + W AY+++N  FA   ++A    N + +D       +W+HDYHLML    +R     
Sbjct: 451 LREQWCAYVRVNYLFA---INAAR--NSRAQD------FIWIHDYHLMLCGQIMRSL--- 496

Query: 434 DEIKCKLAFFLHIPFPP 484
            E    + FF+HIPF P
Sbjct: 497 -ESSLDIGFFIHIPFQP 512



 Score = 34.7 bits (76), Expect = 0.072
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +3

Query: 78  PNEKIPESDPN--DKTPTAGLRSEKIVPIRAEPKLFDSYYNGCCNGTFWPLFHSMP 239
           P ++  ESD +      T    S ++ P+      +++YY G  NG  WP  H++P
Sbjct: 383 PKQQAVESDMSLLSVLNTYNKHSYQLNPVVVNQDDYNTYYGGISNGLLWPALHNLP 438


>U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose
           6-phosphate synthaseprotein 1, isoform a protein.
          Length = 1331

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 27/77 (35%), Positives = 40/77 (51%)
 Frame = +2

Query: 254 LADHWKAYIKINEEFAEKTVHALHLLNKQKKDKNGSPPIVWVHDYHLMLAANWIRQRAEE 433
           L + W AY+++N  FA   ++A    N + +D       +W+HDYHLML    +R     
Sbjct: 488 LREQWCAYVRVNYLFA---INAAR--NSRAQD------FIWIHDYHLMLCGQIMRSL--- 533

Query: 434 DEIKCKLAFFLHIPFPP 484
            E    + FF+HIPF P
Sbjct: 534 -ESSLDIGFFIHIPFQP 549



 Score = 34.7 bits (76), Expect = 0.072
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +3

Query: 78  PNEKIPESDPN--DKTPTAGLRSEKIVPIRAEPKLFDSYYNGCCNGTFWPLFHSMP 239
           P ++  ESD +      T    S ++ P+      +++YY G  NG  WP  H++P
Sbjct: 420 PKQQAVESDMSLLSVLNTYNKHSYQLNPVVVNQDDYNTYYGGISNGLLWPALHNLP 475


>AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative
           trehalose 6-phosphatesynthase protein.
          Length = 1331

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 27/77 (35%), Positives = 40/77 (51%)
 Frame = +2

Query: 254 LADHWKAYIKINEEFAEKTVHALHLLNKQKKDKNGSPPIVWVHDYHLMLAANWIRQRAEE 433
           L + W AY+++N  FA   ++A    N + +D       +W+HDYHLML    +R     
Sbjct: 488 LREQWCAYVRVNYLFA---INAAR--NSRAQD------FIWIHDYHLMLCGQIMRSL--- 533

Query: 434 DEIKCKLAFFLHIPFPP 484
            E    + FF+HIPF P
Sbjct: 534 -ESSLDIGFFIHIPFQP 549



 Score = 34.7 bits (76), Expect = 0.072
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +3

Query: 78  PNEKIPESDPN--DKTPTAGLRSEKIVPIRAEPKLFDSYYNGCCNGTFWPLFHSMP 239
           P ++  ESD +      T    S ++ P+      +++YY G  NG  WP  H++P
Sbjct: 420 PKQQAVESDMSLLSVLNTYNKHSYQLNPVVVNQDDYNTYYGGISNGLLWPALHNLP 475


>AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans
           trehalose-6-phosphate synthase protein.
          Length = 1331

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 27/77 (35%), Positives = 40/77 (51%)
 Frame = +2

Query: 254 LADHWKAYIKINEEFAEKTVHALHLLNKQKKDKNGSPPIVWVHDYHLMLAANWIRQRAEE 433
           L + W AY+++N  FA   ++A    N + +D       +W+HDYHLML    +R     
Sbjct: 488 LREQWCAYVRVNYLFA---INAAR--NSRAQD------FIWIHDYHLMLCGQIMRSL--- 533

Query: 434 DEIKCKLAFFLHIPFPP 484
            E    + FF+HIPF P
Sbjct: 534 -ESSLDIGFFIHIPFQP 549



 Score = 34.7 bits (76), Expect = 0.072
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +3

Query: 78  PNEKIPESDPN--DKTPTAGLRSEKIVPIRAEPKLFDSYYNGCCNGTFWPLFHSMP 239
           P ++  ESD +      T    S ++ P+      +++YY G  NG  WP  H++P
Sbjct: 420 PKQQAVESDMSLLSVLNTYNKHSYQLNPVVVNQDDYNTYYGGISNGLLWPALHNLP 475


>Z78417-12|CAO78731.1|  318|Caenorhabditis elegans Hypothetical
           protein C35C5.10b protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/54 (25%), Positives = 31/54 (57%)
 Frame = -3

Query: 445 FNLIFFSSLSYPISRQHQMVVVNPHDRWTSIFVFLLFVQQMESVDCLLSKLLVY 284
           ++LIF + L+Y +  +  + ++NP    T++ + LL ++      C L +L++Y
Sbjct: 99  YSLIFGAELAYKMISRTGIFLLNPCHVTTTMQLMLLTMEGTSKKACFLFRLMLY 152


>Z78417-11|CAE17739.1|  294|Caenorhabditis elegans Hypothetical
           protein C35C5.10a protein.
          Length = 294

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/54 (25%), Positives = 31/54 (57%)
 Frame = -3

Query: 445 FNLIFFSSLSYPISRQHQMVVVNPHDRWTSIFVFLLFVQQMESVDCLLSKLLVY 284
           ++LIF + L+Y +  +  + ++NP    T++ + LL ++      C L +L++Y
Sbjct: 75  YSLIFGAELAYKMISRTGIFLLNPCHVTTTMQLMLLTMEGTSKKACFLFRLMLY 128


>U37430-2|AAL08045.2|  802|Caenorhabditis elegans Hypothetical
           protein K09F5.6 protein.
          Length = 802

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
 Frame = -3

Query: 223 NGQNVPLQHPL**LSKS--LGSARMGTIFSERRPA--VGVLSLGSDSGIFSLGSSRWMPG 56
           +G NVP   PL    +S    SA   + FSE + +   G   +GS + +   G+ R  PG
Sbjct: 722 SGINVPPPQPLVSREQSPYQRSAIKLSSFSENKGSGIYGTSGIGSGNNVQWGGAQRAAPG 781

Query: 55  HPTQLPW--PRITTG 17
            P QL W  P  T G
Sbjct: 782 QPGQLLWNPPGATNG 796


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,971,435
Number of Sequences: 27780
Number of extensions: 470667
Number of successful extensions: 1293
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)