Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0137
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    24   1.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.0  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   7.0  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   7.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.3  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   9.3  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 140 SFTLSGHGSWAICTSLVILSPTHAT 66
           SFTL  H SW   +S  +LS T++T
Sbjct: 226 SFTLEQHRSWC-SSSQPVLSTTNST 249


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 201 YCQTARIVR*QYLLHFIRLVKFHI 130
           YCQTA +   Q L  F   V  H+
Sbjct: 294 YCQTATMEEKQELYEFSNFVSQHL 317


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 94  KLVQMAQEPWPDNVKLYQPYEVE 162
           KL    Q   P   KL++PY+ E
Sbjct: 253 KLAAEGQTKLPQQPKLFKPYKSE 275


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -3

Query: 203 CTARQLALSGNNICST 156
           CT R+  ++G ++CS+
Sbjct: 101 CTPREPGVAGGDVCSS 116


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 166 SAPLHKAGKVSHYPATALGPFV 101
           S+P H +   S  PA  + P+V
Sbjct: 43  SSPQHSSSSASTSPAARMYPYV 64


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 166 SAPLHKAGKVSHYPATALGPFV 101
           S+P H +   S  PA  + P+V
Sbjct: 43  SSPQHSSSSASTSPAARMYPYV 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,219
Number of Sequences: 336
Number of extensions: 3635
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)