Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0136
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93387-5|CAB54299.3|  134|Caenorhabditis elegans Hypothetical pr...    30   1.0  
AF068716-8|AAC17749.1|  554|Caenorhabditis elegans Innexin prote...    27   9.5  

>Z93387-5|CAB54299.3|  134|Caenorhabditis elegans Hypothetical
           protein T02E9.5 protein.
          Length = 134

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +2

Query: 344 ECTIRRQRPFPGLVASYAPTEGQIACSTQWSGCSD 448
           + T+R +  F G +A YAPT G I CS Q++ C D
Sbjct: 25  DATVRDKTEFCGTMAQYAPT-GDIYCS-QFAMCCD 57


>AF068716-8|AAC17749.1|  554|Caenorhabditis elegans Innexin protein
           4 protein.
          Length = 554

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 342 QSALSGGSGRSRDWWHHMPLLRVRSRVLRNGAAAQTPQHH 461
           Q  L  G GR    +HH  ++ V + VL+N  +A +  H+
Sbjct: 13  QHPLISGQGRESSGYHHAAVVEVGAMVLQNMFSALSFLHY 52


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,303,164
Number of Sequences: 27780
Number of extensions: 207043
Number of successful extensions: 514
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)