Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0135
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   6.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   6.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.9  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 518 LPLKWQMVMFYRQSNGL 568
           L +   MVMFY++SN L
Sbjct: 119 LAMLTSMVMFYKRSNDL 135


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 518 LPLKWQMVMFYRQSNGL 568
           L +   MVMFY++SN L
Sbjct: 75  LAMLTSMVMFYKRSNDL 91


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 17/61 (27%), Positives = 25/61 (40%)
 Frame = +2

Query: 305 LVXIEPVSYKLEDVQLDLKTEHIRQNXPEXFEVRTLRNDEELGATVTTEIEYAYNYTVSW 484
           LV    VS   E +      EH   +  E F ++ L    E  A     I+Y   ++VS+
Sbjct: 313 LVKFYKVSKSGELIHKIETNEHEIIDKIEMFSLQILNERAEFNAAGFFPIDYTLVFSVSF 372

Query: 485 G 487
           G
Sbjct: 373 G 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,940
Number of Sequences: 336
Number of extensions: 3389
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)