Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0135
         (741 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0056 + 422141-422379,422524-422620,422697-422774,422871-42...    29   5.1  
08_01_0004 + 39265-39440,39545-39652,41955-43528,43650-43996,440...    28   6.8  
06_03_0682 + 23487507-23487686                                         28   9.0  

>01_01_0056 +
           422141-422379,422524-422620,422697-422774,422871-422930,
           423019-423123,423743-423856,424145-424186,424380-424496,
           424568-424755,425502-425785,425869-425990,426118-426160,
           426265-426356,427331-427379,427623-427693,427793-427912,
           428586-428674,429266-429311,429926-429973
          Length = 667

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = +2

Query: 344 VQLDLKTEHIRQNXPEXFEVRTLRNDEELGATVTTEIEYAYNYTVSWGHGHGIAIV 511
           V LD + E+  QN P     R+  +D   GA    E+++A  ++  WGHG  + +V
Sbjct: 366 VPLDFEPEN--QNPPFKHLSRSDVSDASEGA----EVQHAREHSAHWGHGDSVNLV 415


>08_01_0004 + 39265-39440,39545-39652,41955-43528,43650-43996,
            44090-44322,45308-45412,45531-45705,46443-46658
          Length = 977

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +3

Query: 6    QLKPDYSSCAVSGSKSYSIFEVLENIENASL--IDW--IPWFKFNARPHGAVASSFSDSV 173
            ++K   SS  VSG + +   E L+N++   L    W  + W+     PHG + ++F    
Sbjct: 813  KIKELVSSVNVSGHQIFGDPEKLQNVKLCDLHPASWFSVAWYPVYRVPHGKLRAAFLTYH 872

Query: 174  FIGRMKASSG 203
             +G++    G
Sbjct: 873  SLGKLVPQKG 882


>06_03_0682 + 23487507-23487686
          Length = 59

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 513 QTIAMPCPWPQETV 472
           QT+A+PC WP  T+
Sbjct: 23  QTVALPCAWPSTTI 36


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,229,612
Number of Sequences: 37544
Number of extensions: 349724
Number of successful extensions: 740
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)