Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0132
         (442 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0492 - 29476883-29476949,29477030-29477166,29477292-294773...    29   2.2  
07_03_0583 - 19684388-19684498,19685083-19685216,19685765-196858...    27   5.1  
04_03_0802 - 19830614-19831275,19831426-19831507                       27   5.1  
03_01_0593 + 4379263-4379377,4380359-4380491,4380585-4380656,438...    27   5.1  
11_03_0177 + 11269754-11270320,11271701-11272180,11272663-112732...    27   6.7  
10_02_0028 + 4331612-4331810,4332588-4333588                           27   8.8  
10_01_0333 + 3675806-3676001,3676783-3677783                           27   8.8  

>02_05_0492 -
           29476883-29476949,29477030-29477166,29477292-29477383,
           29477490-29477587,29477677-29477804,29477883-29478026,
           29478108-29478397,29478553-29478739,29479085-29479210,
           29480488-29480538,29480952-29481002,29482639-29484054
          Length = 928

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = +3

Query: 108 EHLYNDVIIADYDSAVERSKLIYTDNKGELITNVVNNLIRNNKMNCMEYPTSS 266
           EH+  +    + D A     LI  D KG+ + ++   +     M+C   P  S
Sbjct: 744 EHVIGETSSEEEDDAQNNLALINKDVKGQTMADIFQQVFNATSMDCFTLPVRS 796


>07_03_0583 -
           19684388-19684498,19685083-19685216,19685765-19685888,
           19685982-19686251,19686961-19687155,19687236-19687328,
           19687411-19687539,19687646-19689277
          Length = 895

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +2

Query: 173 LHR*QG*AHHKCRKQSDTKQQDELHGVPYQLWMQGSEDIVRDC 301
           +H  +G  HHK R      QQD L G+    W Q +  +  DC
Sbjct: 408 VHTHRGCNHHKRRNGEQESQQDSLVGI---TWSQETGTLSFDC 447


>04_03_0802 - 19830614-19831275,19831426-19831507
          Length = 247

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 422 CLCCPRRQPRHCRS 381
           C CCP R+ RH RS
Sbjct: 144 CKCCPHRRRRHARS 157


>03_01_0593 +
           4379263-4379377,4380359-4380491,4380585-4380656,
           4380739-4380813,4380896-4380967,4381055-4381126,
           4381251-4381322,4381403-4381468,4381547-4381612,
           4381689-4381978,4382072-4382355,4382690-4382961,
           4383411-4383546,4383840-4383970,4384078-4384234,
           4384334-4384477
          Length = 718

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -2

Query: 321 SVNSTGKQSRTMSS--EPCIQSW*GTPCSSS 235
           S+NS G+     +S  +PC QSW G  CS S
Sbjct: 48  SLNSPGQLKGWQASGGDPCGQSWQGITCSGS 78


>11_03_0177 +
           11269754-11270320,11271701-11272180,11272663-11273292,
           11273377-11273443,11273510-11273620,11273696-11275206
          Length = 1121

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = +3

Query: 156 ERSKLIYTDNKGELITNVVNNLIRNNKMNCMEYPTSSGCKAPRTSSGIVSRLS 314
           E++KLI+ D   EL TNV+      ++ N    P     K PR SS IV ++S
Sbjct: 581 EQTKLIFRDEHNELPTNVIAGPAIPSEKN-QPTPLEDN-KGPRDSS-IVDKIS 630


>10_02_0028 + 4331612-4331810,4332588-4333588
          Length = 399

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +3

Query: 252 YPTSSGCKAPRTSSGIVSRLSSHLS*LKTMLSL--CTG 359
           + T SGC+AP     + S L    S  +T+LSL  C+G
Sbjct: 136 FSTYSGCRAPSADLQLASLLGLRPSVSRTILSLHGCSG 173


>10_01_0333 + 3675806-3676001,3676783-3677783
          Length = 398

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +3

Query: 252 YPTSSGCKAPRTSSGIVSRLSSHLS*LKTMLSL--CTG 359
           + T SGC+AP     + S L    S  +T+LSL  C+G
Sbjct: 135 FSTYSGCRAPSADLQLASLLGLRPSVSRTILSLHGCSG 172


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,353,201
Number of Sequences: 37544
Number of extensions: 218500
Number of successful extensions: 614
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)