Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0132
         (442 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D26488-1|BAA05499.1|  686|Homo sapiens KIAA0007 protein.               30   3.1  
BX537437-1|CAD97679.1| 1137|Homo sapiens hypothetical protein pr...    29   9.4  
BX537436-1|CAD97678.1|  974|Homo sapiens hypothetical protein pr...    29   9.4  
BC150186-1|AAI50187.1|  601|Homo sapiens CACNA2D4 protein protein.     29   9.4  
AF516695-1|AAN06672.1| 1120|Homo sapiens voltage-gated calcium c...    29   9.4  

>D26488-1|BAA05499.1|  686|Homo sapiens KIAA0007 protein.
          Length = 686

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 13/37 (35%), Positives = 25/37 (67%)
 Frame = +3

Query: 162 SKLIYTDNKGELITNVVNNLIRNNKMNCMEYPTSSGC 272
           S L+Y+  KGEL + +++    +N++NC+++   SGC
Sbjct: 114 SILLYSTVKGELHSKLISGG-HDNRVNCIQWHQDSGC 149


>BX537437-1|CAD97679.1| 1137|Homo sapiens hypothetical protein
           protein.
          Length = 1137

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +3

Query: 51  LFAASLYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGELITNV-VNNLIR 227
           L  A+  AD    FNE L    YN V+I + D   E+   +    +  L +N   +NL  
Sbjct: 144 LVEAAEEADLNHEFNESLVFDYYNSVLINERD---EKGNFVELGAEFLLESNAHFSNLPV 200

Query: 228 NNKMNCMEYPTSSGCKAPRTSSGI 299
           N  ++ ++ PT+   K P   +G+
Sbjct: 201 NTSISSVQLPTNVYNKDPDILNGV 224


>BX537436-1|CAD97678.1|  974|Homo sapiens hypothetical protein
           protein.
          Length = 974

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +3

Query: 51  LFAASLYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGELITNV-VNNLIR 227
           L  A+  AD    FNE L    YN V+I + D   E+   +    +  L +N   +NL  
Sbjct: 144 LVEAAEEADLNHEFNESLVFDYYNSVLINERD---EKGNFVELGAEFLLESNAHFSNLPV 200

Query: 228 NNKMNCMEYPTSSGCKAPRTSSGI 299
           N  ++ ++ PT+   K P   +G+
Sbjct: 201 NTSISSVQLPTNVYNKDPDILNGV 224


>BC150186-1|AAI50187.1|  601|Homo sapiens CACNA2D4 protein protein.
          Length = 601

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +3

Query: 51  LFAASLYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGELITNV-VNNLIR 227
           L  A+  AD    FNE L    YN V+I + D   E+   +    +  L +N   +NL  
Sbjct: 144 LVEAAEEADLNHEFNESLVFDYYNSVLINERD---EKGNFVELGAEFLLESNAHFSNLPV 200

Query: 228 NNKMNCMEYPTSSGCKAPRTSSGI 299
           N  ++ ++ PT+   K P   +G+
Sbjct: 201 NTSISSVQLPTNVYNKDPDILNGV 224


>AF516695-1|AAN06672.1| 1120|Homo sapiens voltage-gated calcium
           channel alpha(2)delta-4 subunit protein.
          Length = 1120

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +3

Query: 51  LFAASLYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGELITNV-VNNLIR 227
           L  A+  AD    FNE L    YN V+I + D   E+   +    +  L +N   +NL  
Sbjct: 127 LVEAAEEADLNHEFNESLVFDYYNSVLINERD---EKGNFVELGAEFLLESNAHFSNLPV 183

Query: 228 NNKMNCMEYPTSSGCKAPRTSSGI 299
           N  ++ ++ PT+   K P   +G+
Sbjct: 184 NTSISSVQLPTNVYNKDPDILNGV 207


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,868,699
Number of Sequences: 237096
Number of extensions: 1197176
Number of successful extensions: 2658
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2654
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)