Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0131
         (790 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ...    31   0.71 
Z66514-6|CAA91345.3|  337|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z46996-10|CAL22702.1|  337|Caenorhabditis elegans Hypothetical p...    28   6.6  

>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
           protein Y53F4B.9 protein.
          Length = 1168

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
 Frame = +3

Query: 285 TTGRRLIDEICQIAAYTPKQTY--SQYIMPYGD-----LNPGARRRHNVRV-VTVGRYRM 440
           T+G+   ++IC I   TP+  Y  +  +MP+ D     +NP   R   V++ +T      
Sbjct: 162 TSGKLKFNKICSIRVITPRPNYNPNDLVMPHSDDEEDTMNPNRERLSTVKLRLTPTSQAK 221

Query: 441 LKDMVSHKILKTKSEI 488
           L+ M S  + +  +E+
Sbjct: 222 LEQMQSEDVFQFNAEM 237


>Z66514-6|CAA91345.3|  337|Caenorhabditis elegans Hypothetical
           protein K01A11.3 protein.
          Length = 337

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 19/91 (20%), Positives = 39/91 (42%)
 Frame = +3

Query: 237 SRSPTRKYSLIGWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRV 416
           ++ P + ++ +  D+ T      + +C + +Y    T   Y    G+      +R +   
Sbjct: 142 AQRPFKAFNALMEDLSTECGARHEPLCSMFSYQLISTLKGYTGGCGEYQLSIEKRTSCLE 201

Query: 417 VTVGRYRMLKDMVSHKILKTKSEISALTDFL 509
            T+G+ R   D+V+ K  K   + +   DFL
Sbjct: 202 YTLGKRRTFLDVVASKEQKCLKKHTVEGDFL 232


>Z46996-10|CAL22702.1|  337|Caenorhabditis elegans Hypothetical
           protein K01A11.3 protein.
          Length = 337

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 19/91 (20%), Positives = 39/91 (42%)
 Frame = +3

Query: 237 SRSPTRKYSLIGWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRV 416
           ++ P + ++ +  D+ T      + +C + +Y    T   Y    G+      +R +   
Sbjct: 142 AQRPFKAFNALMEDLSTECGARHEPLCSMFSYQLISTLKGYTGGCGEYQLSIEKRTSCLE 201

Query: 417 VTVGRYRMLKDMVSHKILKTKSEISALTDFL 509
            T+G+ R   D+V+ K  K   + +   DFL
Sbjct: 202 YTLGKRRTFLDVVASKEQKCLKKHTVEGDFL 232


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,334,940
Number of Sequences: 27780
Number of extensions: 395586
Number of successful extensions: 1046
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)