Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0131
         (790 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g59100.1 68416.m06589 glycosyl transferase family 48 protein ...    30   2.0  
At4g03090.1 68417.m00417 expressed protein                             29   3.5  
At3g51070.1 68416.m05592 dehydration-responsive protein-related ...    29   4.6  
At5g13000.1 68418.m01490 glycosyl transferase family 48 protein ...    28   6.1  
At5g56350.1 68418.m07033 pyruvate kinase, putative similar to py...    28   8.1  
At5g22920.1 68418.m02680 zinc finger (C3HC4-type RING finger) fa...    28   8.1  
At1g21540.1 68414.m02694 AMP-binding protein, putative strong si...    28   8.1  

>At3g59100.1 68416.m06589 glycosyl transferase family 48 protein
            contains Pfam profile: PF02364 1,3-beta-glucan synthase
          Length = 1934

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/58 (25%), Positives = 24/58 (41%)
 Frame = -1

Query: 280  MSQPIREYFLVGDRLASQPVREALQYSLPFRFPFTFHFSHHGPLMPNFANSFDEQMFG 107
            MS     +  +G R+ + P+R    Y  P  F   FH +  G    +   +  E +FG
Sbjct: 1374 MSNQESSFVTIGQRILANPLRVRFHYGHPDIFDRIFHITRGGVSKASKVINLSEDIFG 1431


>At4g03090.1 68417.m00417 expressed protein 
          Length = 877

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +2

Query: 8   HVLRYCDILQQ*NNFKTFVVHHTGSTGAQYFCFTKHLFIKRVC 136
           + +R  D+L   +NF++F   H     +  FC +   F+  +C
Sbjct: 348 NAMRLADVLTDDSNFRSFFTEHFSMVLSAVFCLSHGDFLSMLC 390


>At3g51070.1 68416.m05592 dehydration-responsive protein-related
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase
          Length = 895

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 161 VTEVKSEWEAKWKRILKCLPHWLRSQSV 244
           V E  S+W   W R L+  P+WL S  +
Sbjct: 686 VVERGSKWPVNWPRRLQTPPYWLNSSQM 713


>At5g13000.1 68418.m01490 glycosyl transferase family 48 protein
            contains Pfam profile: PF02364 1,3-beta-glucan synthase
          Length = 1889

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/57 (26%), Positives = 23/57 (40%)
 Frame = -1

Query: 280  MSQPIREYFLVGDRLASQPVREALQYSLPFRFPFTFHFSHHGPLMPNFANSFDEQMF 110
            MS     +  +G RL + P+R    Y  P  F   FH +  G    +   +  E +F
Sbjct: 1438 MSNQETSFVTIGQRLLANPLRVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIF 1494


>At5g56350.1 68418.m07033 pyruvate kinase, putative similar to
           pyruvate kinase, cytosolic isozyme [Nicotiana tabacum]
           SWISS-PROT:Q42954
          Length = 498

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 21/57 (36%), Positives = 27/57 (47%)
 Frame = -1

Query: 688 PLHLICSQCIAVSESCDY*IKTIQQVVPCQSLKKHCRTEPPGFVVYKNDTTISFLFL 518
           P+ L   Q I +S   DY +K  +  + C S KK      PG V+   D TIS L L
Sbjct: 88  PIQLKQGQEITIST--DYDLKGDENTI-CMSYKKLAVDVNPGMVILCADGTISLLVL 141


>At5g22920.1 68418.m02680 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profiles:PF05495 CHY zinc
           finger, PF00097 zinc finger, C3HC4 type (RING finger)
          Length = 291

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 294 VLLYPCPSR*ESTSWWETDWLLSQCGRHFSIRFHFASH 181
           V  YP P   E+   W    L + CG + ++RFH  +H
Sbjct: 223 VAAYPMPKMYENKMVWI---LCNDCGSNTNVRFHLIAH 257


>At1g21540.1 68414.m02694 AMP-binding protein, putative strong
           similarity to AMP-binding protein GI:1903034 from
           [Brassica napus]; contains Pfam AMP-binding domain
           PF00501; identical to cDNA adenosine monophosphate
           binding protein 9 AMPBP9 (AMPBP9) GI:20799726
          Length = 550

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 242 VSHQEVLSYRLGHGYNRTET 301
           +S  E L + +GHGY  TET
Sbjct: 316 ISRAETLGFNVGHGYGLTET 335


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,268,944
Number of Sequences: 28952
Number of extensions: 370489
Number of successful extensions: 956
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)