Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0130
         (524 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||...    25   6.9  
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||...    25   6.9  
SPAC56F8.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual        25   9.1  
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc...    25   9.1  
SPCC622.21 |wtf12||wtf element Wtf12|Schizosaccharomyces pombe|c...    25   9.1  
SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces po...    25   9.1  

>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 673

 Score = 25.0 bits (52), Expect = 6.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 224 SIIRSHGNDYFKDLEYYND 280
           S+   HG++  ++L YYND
Sbjct: 208 SVFAPHGDNVIENLNYYND 226


>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 673

 Score = 25.0 bits (52), Expect = 6.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 224 SIIRSHGNDYFKDLEYYND 280
           S+   HG++  ++L YYND
Sbjct: 208 SVFAPHGDNVIENLNYYND 226


>SPAC56F8.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 176

 Score = 24.6 bits (51), Expect = 9.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 164 LIVFLVFSVCEGSLGLSILVSII 232
           +  FLVFS CE  +G S+   +I
Sbjct: 1   MFFFLVFSACEVFVGFSLCTLVI 23


>SPAC6G9.04 |mug79||meiotically upregulated gene
            Mug79|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1318

 Score = 24.6 bits (51), Expect = 9.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 272  YNDKIFIYNNFYNSFMFYKKYILIGSNNIIFY 367
            Y   +   NN + +  + KKY ++ S  +IFY
Sbjct: 1052 YKKMVLSKNNRWVAGYWKKKYCIVDSGKLIFY 1083


>SPCC622.21 |wtf12||wtf element Wtf12|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 197

 Score = 24.6 bits (51), Expect = 9.1
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +2

Query: 140 FIDYDIYILIVFLVFSVCEGSLGLSILVSIIRSHGND 250
           F+   +  LI+ +   +  G +G+SI+  +I  +GND
Sbjct: 122 FVLIGLTCLILLITMILEPGLIGISIMKRLIGDNGND 158


>SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 467

 Score = 24.6 bits (51), Expect = 9.1
 Identities = 20/85 (23%), Positives = 38/85 (44%)
 Frame = +2

Query: 209 LSILVSIIRSHGNDYFKDLEYYNDKIFIYNNFYNSFMFYKKYILIGSNNIIFYNIFVYKF 388
           LS  V ++R  G+   K+ + +   I I     N    Y+K   + S +I  Y +  YK 
Sbjct: 88  LSHSVHVLRKEGHKCSKEFDPFLHGIPIPQKALN---IYEKQRSLFSESISNYLVLQYKL 144

Query: 389 KF*ILYVFXI*DIYXXCDIISFGLI 463
           ++  ++   I D +    II+  ++
Sbjct: 145 RYFPVFDLKIYDFHSGTGIIALDIL 169


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,459
Number of Sequences: 5004
Number of extensions: 11740
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 214353836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)