Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0130
         (524 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084160-1|AAL89898.1|  264|Drosophila melanogaster RE36854p pro...    31   0.96 
AF145314-1|AAF08395.1|  264|Drosophila melanogaster 26S proteaso...    31   0.96 
AE014296-2760|AAF49445.1|  264|Drosophila melanogaster CG4157-PA...    31   0.96 
AE013599-1472|AAF58520.1|  166|Drosophila melanogaster CG8836-PA...    30   1.7  

>AY084160-1|AAL89898.1|  264|Drosophila melanogaster RE36854p
           protein.
          Length = 264

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +2

Query: 203 LGLSILVSIIRSHGNDYFKDLEYYNDKIFIYNNFYNSFMFYKKYILIGSNNIIF 364
           LGL++L  +  +  +D+  +LE  +  +  +N F    +  ++YI+ G  N IF
Sbjct: 107 LGLNLLYLLSGNRVSDFHTELELLSVDVIQHNQFIRPILALEQYIMEGRYNKIF 160


>AF145314-1|AAF08395.1|  264|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p30 protein.
          Length = 264

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +2

Query: 203 LGLSILVSIIRSHGNDYFKDLEYYNDKIFIYNNFYNSFMFYKKYILIGSNNIIF 364
           LGL++L  +  +  +D+  +LE  +  +  +N F    +  ++YI+ G  N IF
Sbjct: 107 LGLNLLYLLSGNRVSDFHTELELLSVDVIQHNQFIRPILALEQYIMEGRYNKIF 160


>AE014296-2760|AAF49445.1|  264|Drosophila melanogaster CG4157-PA
           protein.
          Length = 264

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +2

Query: 203 LGLSILVSIIRSHGNDYFKDLEYYNDKIFIYNNFYNSFMFYKKYILIGSNNIIF 364
           LGL++L  +  +  +D+  +LE  +  +  +N F    +  ++YI+ G  N IF
Sbjct: 107 LGLNLLYLLSGNRVSDFHTELELLSVDVIQHNQFIRPILALEQYIMEGRYNKIF 160


>AE013599-1472|AAF58520.1|  166|Drosophila melanogaster CG8836-PA
           protein.
          Length = 166

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 245 NDYFKDLEYYNDKIFIYNNFYNSFMFYKKY 334
           N Y++DL Y N  ++    FY+   FYKKY
Sbjct: 31  NPYYRDLYYRNRDLYNLRRFYDG--FYKKY 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,688,004
Number of Sequences: 53049
Number of extensions: 101136
Number of successful extensions: 248
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)