Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0130
         (524 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75537-6|CAA99838.2|  348|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z75527-9|CAA99780.2|  348|Caenorhabditis elegans Hypothetical pr...    27   8.2  
AY008135-1|AAG32088.1|  348|Caenorhabditis elegans heterotrimeri...    27   8.2  

>Z75537-6|CAA99838.2|  348|Caenorhabditis elegans Hypothetical
           protein F18E2.5 protein.
          Length = 348

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +2

Query: 152 DIYILIVFLVFSVCEGSLGLSILVSIIRSHGNDYFKDLEYYNDKIFIYNNFYNS 313
           D Y  I  L+    E   G + ++  +R     +F + EY++ + FIY+N + S
Sbjct: 31  DPYSHIRLLLLGSAES--GKTTVLEQVRLLYKQHFTESEYFHRRAFIYHNIFKS 82


>Z75527-9|CAA99780.2|  348|Caenorhabditis elegans Hypothetical
           protein F18E2.5 protein.
          Length = 348

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +2

Query: 152 DIYILIVFLVFSVCEGSLGLSILVSIIRSHGNDYFKDLEYYNDKIFIYNNFYNS 313
           D Y  I  L+    E   G + ++  +R     +F + EY++ + FIY+N + S
Sbjct: 31  DPYSHIRLLLLGSAES--GKTTVLEQVRLLYKQHFTESEYFHRRAFIYHNIFKS 82


>AY008135-1|AAG32088.1|  348|Caenorhabditis elegans heterotrimeric G
           protein alphasubunit protein.
          Length = 348

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +2

Query: 152 DIYILIVFLVFSVCEGSLGLSILVSIIRSHGNDYFKDLEYYNDKIFIYNNFYNS 313
           D Y  I  L+    E   G + ++  +R     +F + EY++ + FIY+N + S
Sbjct: 31  DPYSHIRLLLLGSAES--GKTTVLEQVRLLYKQHFTESEYFHRRAFIYHNIFKS 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,417,244
Number of Sequences: 27780
Number of extensions: 63609
Number of successful extensions: 218
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)