Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0129
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.5  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   5.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   5.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   5.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   5.9  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   5.9  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   5.9  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    22   5.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   5.9  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 301 KKNTDAMRSFSFPFIALQDVTVEQPMFSANCIKGKVR 411
           +   D ++ F  P + +QDVT++   FS   ++ K R
Sbjct: 649 RNGVDTLQQFLTPNMRVQDVTIK---FSDRTVRPKQR 682


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 420 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 307
           R  T++T Y      + FH       +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 420 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 307
           R  T++T Y      + FH       +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 420 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 307
           R  T++T Y      + FH       +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 420 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 307
           R  T++T Y      + FH       +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 420 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 307
           R  T++T Y      + FH       +R+ E +H +C+
Sbjct: 178 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 215


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 420 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 307
           R  T++T Y      + FH       +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 420 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 307
           R  T++T Y      + FH       +R+ E +H +C+
Sbjct: 10  RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 47


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 420 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 307
           R  T++T Y      + FH       +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,297
Number of Sequences: 336
Number of extensions: 3347
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)