Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0129
         (738 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060828-1|AAL28376.1|  337|Drosophila melanogaster GM01318p pro...   142   4e-34
AE014296-2207|AAF49872.2|  427|Drosophila melanogaster CG11009-P...   142   4e-34
BT001295-1|AAN71050.1|  536|Drosophila melanogaster AT11052p pro...    32   0.71 
AE013599-3570|AAM68240.2|  539|Drosophila melanogaster CG30416-P...    32   0.71 

>AY060828-1|AAL28376.1|  337|Drosophila melanogaster GM01318p
           protein.
          Length = 337

 Score =  142 bits (344), Expect = 4e-34
 Identities = 62/87 (71%), Positives = 79/87 (90%)
 Frame = +1

Query: 247 GDQEGRMYLTTHRMIYNSKKNTDAMRSFSFPFIALQDVTVEQPMFSANCIKGKVRAQPNG 426
           G + GR+YLT+HRMI+NSKK++D+M+SFS PF+AL DV +EQP+F AN IKGKVRAQPNG
Sbjct: 41  GSKGGRIYLTSHRMIFNSKKSSDSMQSFSAPFVALSDVEIEQPVFGANYIKGKVRAQPNG 100

Query: 427 NFIGEVKFKLTFKSGGAIEYGQAMLKA 507
           N++GEVKFKL FK+GGAIEYGQA+L++
Sbjct: 101 NYVGEVKFKLHFKAGGAIEYGQALLRS 127



 Score = 64.1 bits (149), Expect = 2e-10
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +2

Query: 128 MSLNTAHADHGVLIHAGECIILFSDNVSVEFYGNDTPEFKG 250
           MS+NTAHA++GVLIHAGE I+L SD+VS+EF G D P FKG
Sbjct: 1   MSVNTAHANNGVLIHAGEYILLHSDSVSMEFSGQDNPIFKG 41



 Score = 33.5 bits (73), Expect = 0.31
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 630 WVPPYSAFPDQPPPXSVFVSNTPPPLPWAVTGASYP 737
           W+P + AF   P P +V++S+ PPP P     A  P
Sbjct: 171 WLPQHDAFSG-PAPNTVYMSDNPPPYPGIAPPAHQP 205


>AE014296-2207|AAF49872.2|  427|Drosophila melanogaster CG11009-PA
           protein.
          Length = 427

 Score =  142 bits (344), Expect = 4e-34
 Identities = 62/87 (71%), Positives = 79/87 (90%)
 Frame = +1

Query: 247 GDQEGRMYLTTHRMIYNSKKNTDAMRSFSFPFIALQDVTVEQPMFSANCIKGKVRAQPNG 426
           G + GR+YLT+HRMI+NSKK++D+M+SFS PF+AL DV +EQP+F AN IKGKVRAQPNG
Sbjct: 41  GSKGGRIYLTSHRMIFNSKKSSDSMQSFSAPFVALSDVEIEQPVFGANYIKGKVRAQPNG 100

Query: 427 NFIGEVKFKLTFKSGGAIEYGQAMLKA 507
           N++GEVKFKL FK+GGAIEYGQA+L++
Sbjct: 101 NYVGEVKFKLHFKAGGAIEYGQALLRS 127



 Score = 64.1 bits (149), Expect = 2e-10
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +2

Query: 128 MSLNTAHADHGVLIHAGECIILFSDNVSVEFYGNDTPEFKG 250
           MS+NTAHA++GVLIHAGE I+L SD+VS+EF G D P FKG
Sbjct: 1   MSVNTAHANNGVLIHAGEYILLHSDSVSMEFSGQDNPIFKG 41



 Score = 33.5 bits (73), Expect = 0.31
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 630 WVPPYSAFPDQPPPXSVFVSNTPPPLPWAVTGASYP 737
           W+P + AF   P P +V++S+ PPP P     A  P
Sbjct: 171 WLPQHDAFSG-PAPNTVYMSDNPPPYPGIAPPAHQP 205


>BT001295-1|AAN71050.1|  536|Drosophila melanogaster AT11052p
           protein.
          Length = 536

 Score = 32.3 bits (70), Expect = 0.71
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 633 VPPYSAFPDQPPPXSVFVSNTPPP--LPWAVTGAS 731
           +PP S  P   PP S   S TPPP  LP ++T  S
Sbjct: 318 IPPPSQLPSDIPPPSQLPSGTPPPSRLPTSITPPS 352


>AE013599-3570|AAM68240.2|  539|Drosophila melanogaster CG30416-PA
           protein.
          Length = 539

 Score = 32.3 bits (70), Expect = 0.71
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 633 VPPYSAFPDQPPPXSVFVSNTPPP--LPWAVTGAS 731
           +PP S  P   PP S   S TPPP  LP ++T  S
Sbjct: 318 IPPPSQLPSDIPPPSQLPSGTPPPSRLPTSITPPS 352


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,872,670
Number of Sequences: 53049
Number of extensions: 590545
Number of successful extensions: 1895
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1839
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)