Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0129
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40413-2|AAK39174.1|  296|Caenorhabditis elegans Hypothetical pr...    87   9e-18
Z47808-4|CAA87772.1|  235|Caenorhabditis elegans Hypothetical pr...    81   6e-16
AF100305-5|AAN65285.1|  353|Caenorhabditis elegans Hypothetical ...    31   0.64 
AF100305-4|AAC68916.2|  426|Caenorhabditis elegans Hypothetical ...    31   0.64 
AF100305-3|AAL65795.1|  426|Caenorhabditis elegans Hypothetical ...    31   0.64 
U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical p...    28   6.0  
AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical ...    28   6.0  
Z69904-3|CAA93780.1|  372|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>U40413-2|AAK39174.1|  296|Caenorhabditis elegans Hypothetical
           protein C18B2.4 protein.
          Length = 296

 Score = 87.4 bits (207), Expect = 9e-18
 Identities = 36/85 (42%), Positives = 61/85 (71%)
 Frame = +1

Query: 253 QEGRMYLTTHRMIYNSKKNTDAMRSFSFPFIALQDVTVEQPMFSANCIKGKVRAQPNGNF 432
           + G +YLT+HR+I+ ++   D  +SF+ PF +++DV +EQP+ + N +KG V+  P GNF
Sbjct: 45  KSGALYLTSHRIIFMNESKKDEFKSFAMPFNSVRDVKLEQPLLTPNYLKGWVQPMPGGNF 104

Query: 433 IGEVKFKLTFKSGGAIEYGQAMLKA 507
            G  +++L+F  GG IE+G+A+L+A
Sbjct: 105 DGCPEWRLSFPKGGCIEFGEALLRA 129



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
 Frame = +2

Query: 128 MSLNTAHAD--HGVLIHAGECIILFSDNVSVEFYGNDTPEFKGIR 256
           MSLNT+H     G+LI+ GE I+L++ NV ++F   + P FK  +
Sbjct: 1   MSLNTSHTPDGQGILIYNGEMILLYTTNVKLKFEKYNVPAFKSTK 45



 Score = 34.3 bits (75), Expect = 0.091
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 639 PYSAFPDQPPPXSVFVSNTPPPLPWAVTGASYP 737
           P + FP++PP  +V+V + PPP P       YP
Sbjct: 177 PTNVFPERPPAQNVYVYDMPPPYPGIGQTTPYP 209


>Z47808-4|CAA87772.1|  235|Caenorhabditis elegans Hypothetical
           protein D2013.6 protein.
          Length = 235

 Score = 81.4 bits (192), Expect = 6e-16
 Identities = 38/87 (43%), Positives = 57/87 (65%)
 Frame = +1

Query: 247 GDQEGRMYLTTHRMIYNSKKNTDAMRSFSFPFIALQDVTVEQPMFSANCIKGKVRAQPNG 426
           G + G +YLT+HR+I+      D ++SF  PF ++QDV + QP+F AN + G   A   G
Sbjct: 43  GRRTGTIYLTSHRIIFMPDPG-DWLKSFEIPFNSMQDVNLNQPIFGANYLCGIASAVQGG 101

Query: 427 NFIGEVKFKLTFKSGGAIEYGQAMLKA 507
              GEVK+++TF  GG IE+GQ++L+A
Sbjct: 102 QMRGEVKWRMTFNRGGCIEFGQSLLQA 128



 Score = 37.1 bits (82), Expect = 0.013
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +3

Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLP 710
           P   +FPDQP P  VF+S+ PPP P
Sbjct: 172 PTTDSFPDQPNPSRVFMSSAPPPYP 196


>AF100305-5|AAN65285.1|  353|Caenorhabditis elegans Hypothetical
           protein W04B5.3c protein.
          Length = 353

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 630 WVPPYSAFPDQPPPXSVFVSNTPPPLPWAVTGASYP 737
           +  PY++ P   PP SV +S TP P P      +YP
Sbjct: 269 YTSPYTSVPMPQPPSSVPLSYTPAPTPSVPYTVTYP 304


>AF100305-4|AAC68916.2|  426|Caenorhabditis elegans Hypothetical
           protein W04B5.3a protein.
          Length = 426

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 630 WVPPYSAFPDQPPPXSVFVSNTPPPLPWAVTGASYP 737
           +  PY++ P   PP SV +S TP P P      +YP
Sbjct: 269 YTSPYTSVPMPQPPSSVPLSYTPAPTPSVPYTVTYP 304


>AF100305-3|AAL65795.1|  426|Caenorhabditis elegans Hypothetical
           protein W04B5.3b protein.
          Length = 426

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 630 WVPPYSAFPDQPPPXSVFVSNTPPPLPWAVTGASYP 737
           +  PY++ P   PP SV +S TP P P      +YP
Sbjct: 269 YTSPYTSVPMPQPPSSVPLSYTPAPTPSVPYTVTYP 304


>U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical
           protein K08F11.2 protein.
          Length = 886

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 191 LFSDNVSVEFYGNDTPEFKGIRRD 262
           L+S + SV  + N+TP  KGIR D
Sbjct: 129 LYSSSDSVGVFSNETPYVKGIRED 152


>U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical
           protein K08D10.1 protein.
          Length = 895

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 191 LFSDNVSVEFYGNDTPEFKGIRRD 262
           L+S + SV  + N+TP  KGIR D
Sbjct: 129 LYSSSDSVGVFSNETPYVKGIRED 152


>AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical
           protein Y20F4.5 protein.
          Length = 725

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 191 LFSDNVSVEFYGNDTPEFKGIRRD 262
           L+S + SV  + N+TP  KGIR D
Sbjct: 129 LYSSSDSVGVFSNETPYVKGIRED 152


>Z69904-3|CAA93780.1|  372|Caenorhabditis elegans Hypothetical
           protein ZK20.3 protein.
          Length = 372

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 738 SGKMLQSPPRVGEVGYSTQILSXVEVGLEKQNKVAP 631
           +GK+L    +VGEVG+ +     V +   K  +VAP
Sbjct: 99  NGKILDDSVKVGEVGFDSSKFVVVMLSKRKVTEVAP 134


>Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical
           protein C09G5.2 protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 122 CIMSLNTAHADHGVLIHAGE-CIILFSDNVSVEFYGNDTPEF 244
           C+  +  AHAD   L+H GE C    +D + V++     P F
Sbjct: 102 CVDEVAAAHADCTALVHFGEACHSAPTDKIDVKYVLGSMPIF 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,705,363
Number of Sequences: 27780
Number of extensions: 302842
Number of successful extensions: 854
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)