Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0129
(738 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g11680.1 68418.m01365 expressed protein predicted proteins, A... 40 0.001
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 32 0.35
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 32 0.35
At1g48620.1 68414.m05439 histone H1/H5 family protein weak simil... 31 0.80
At1g63020.1 68414.m07117 DNA-directed RNA polymerase alpha subun... 31 1.1
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 30 1.8
At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family... 30 1.8
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 29 2.4
At3g10300.3 68416.m01236 calcium-binding EF hand family protein ... 29 3.2
At3g10300.2 68416.m01235 calcium-binding EF hand family protein ... 29 3.2
At3g10300.1 68416.m01234 calcium-binding EF hand family protein ... 29 3.2
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 29 4.3
At1g26250.1 68414.m03202 proline-rich extensin, putative similar... 29 4.3
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 28 5.6
At1g26390.1 68414.m03219 FAD-binding domain-containing protein s... 28 5.6
At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family... 28 7.4
At4g08370.1 68417.m01382 proline-rich extensin-like family prote... 28 7.4
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 28 7.4
At1g70990.1 68414.m08190 proline-rich family protein 28 7.4
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 28 7.4
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 27 9.8
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 27 9.8
At3g11030.1 68416.m01331 expressed protein contains Pfam domain ... 27 9.8
At1g66980.1 68414.m07616 protein kinase family protein / glycero... 27 9.8
At1g26240.1 68414.m03201 proline-rich extensin-like family prote... 27 9.8
>At5g11680.1 68418.m01365 expressed protein predicted proteins,
Arabidopsis thaliana
Length = 207
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +1
Query: 256 EGRMYLTTHRMIYNSKKNTDAMRSFSFPFIALQDVTVEQPMFSANCIKGKVRAQPNGN-- 429
+G +YL+ RM++ S K D +F P + + QP+F N I G+V N
Sbjct: 46 KGVIYLSNIRMVFVSSKPVDNFVAFDMPLLYIHAEKFNQPIFHCNNIAGQVEPVVPENEH 105
Query: 430 --FIGEVKFKLTFKSGG 474
FK+ FK GG
Sbjct: 106 RALYSTHSFKILFKEGG 122
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLP 710
PP S P PPP S+ S+ PPP P
Sbjct: 49 PPSSLSPSSPPPLSLSPSSPPPPPP 73
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLP 710
PP S P PPP S+ S+ PPP P
Sbjct: 98 PPSSLSPSSPPPLSLSPSSPPPPPP 122
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 32.3 bits (70), Expect = 0.35
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLP 710
PPY + PPP + + + +PPP P
Sbjct: 598 PPYYQYTSSPPPPTYYATQSPPPPP 622
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLP 710
PP S P PPP ++ S+ PPP P
Sbjct: 531 PPLSPPPPSPPPPYIY-SSPPPPSP 554
>At1g48620.1 68414.m05439 histone H1/H5 family protein weak
similarity to HMG I/Y like protein [Glycine max]
GI:15706274, HMG-I/Y protein HMGa [Triticum aestivum]
GI:20502966; contains Pfam profiles PF00538: linker
histone H1 and H5 family, PF02178: AT hook motif
Length = 479
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLPWAVTGASYP 737
PP S P PP S F+ N PLP V +S P
Sbjct: 149 PPTSVAPSLEPPRSDFIVNENQPLPDPVLASSTP 182
>At1g63020.1 68414.m07117 DNA-directed RNA polymerase alpha subunit
family protein low similarity to RNA polymerase IIA
largest subunit [Trypanosoma brucei] GI:162215; contains
InterPro accession IPR000722: RNA polymerase, alpha
subunit
Length = 1453
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 533 CHMTRSKMTAFNMACPYSIAPPD-LKVSLNLTSP 435
C++ R++M M CP+ + PP +K S + T P
Sbjct: 506 CYLNRAQMQQLQMYCPFQLPPPAIIKASPSSTEP 539
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLP 710
PP + PPP V+ S+ PPP P
Sbjct: 642 PPPPVYYSSPPPPPVYYSSPPPPPP 666
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLP 710
P YS P PPP V+ PPP P
Sbjct: 434 PVYSPPPPPPPPPPVYSPPPPPPPP 458
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLPWAVT 722
PP+S P PP ++ +PPP P V+
Sbjct: 571 PPHSPPPPHSPPPPIYPYLSPPPPPTPVS 599
>At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family
protein similar to SWISS-PROT:Q15428
Length = 277
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLPWAVTG 725
PP+ A P PPP +F PPP P A G
Sbjct: 236 PPHQAQPPPPPPSGLF---PPPPPPMANNG 262
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLPWAVTGASYP 737
PP +A P PPP + PPP P GA P
Sbjct: 389 PPSAAAPPPPPPPKKGPAAPPPPPPPGKKGAGPP 422
>At3g10300.3 68416.m01236 calcium-binding EF hand family protein low
similarity to SP|P12815 Programmed cell death protein 6
(Probable calcium-binding protein ALG-2) {Mus musculus};
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 335
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPP 704
PPY + + PPP SN PPP
Sbjct: 22 PPYGSTGNNPPPYGSSGSNPPPP 44
>At3g10300.2 68416.m01235 calcium-binding EF hand family protein low
similarity to SP|P12815 Programmed cell death protein 6
(Probable calcium-binding protein ALG-2) {Mus musculus};
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 324
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPP 704
PPY + + PPP SN PPP
Sbjct: 22 PPYGSTGNNPPPYGSSGSNPPPP 44
>At3g10300.1 68416.m01234 calcium-binding EF hand family protein low
similarity to SP|P12815 Programmed cell death protein 6
(Probable calcium-binding protein ALG-2) {Mus musculus};
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 232
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPP 704
PPY + + PPP SN PPP
Sbjct: 22 PPYGSTGNNPPPYGSSGSNPPPP 44
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLPWAVTGASYP 737
PP PPP + +TPPP P + G P
Sbjct: 87 PPLITVIHPPPPRFYYFESTPPPPPLSPDGKGSP 120
>At1g26250.1 68414.m03202 proline-rich extensin, putative similar to
extensin gi|1165322|gb|AAB53156; contains proline-rich
extensin domains, INTERPRO:IPR002965
Length = 443
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLPWAVTGASYP 737
PPY P PPP +V +PPP P+ + P
Sbjct: 163 PPYVYSPPPPPP---YVYQSPPPPPYVYSSPPPP 193
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLPWAVTGASYP 737
PPY + PPP +V N+PPP P+ + P
Sbjct: 73 PPY-VYSSPPPPP--YVYNSPPPPPYVYSSPPPP 103
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLPWAVTGASYP 737
PPY + PPP V+ S PPP P+ T P
Sbjct: 303 PPY-VYSSPPPPPYVYKS--PPPPPYVYTSPPPP 333
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPP 704
PPY + PPP V+ S PPP
Sbjct: 313 PPY-VYKSPPPPPYVYTSPPPPP 334
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLPW 713
PP+ + P QPPP + PPP P+
Sbjct: 46 PPHFSPPHQPPPSPYPHPHPPPPSPY 71
>At1g26390.1 68414.m03219 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 530
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 626 WMGATLFCFSRPTSTXLSICVEYPTSP 706
W+ +TLF P T SI ++ P+SP
Sbjct: 339 WLNSTLFWADYPAGTPTSILLDRPSSP 365
>At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family
protein
Length = 421
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLPWAVTG 725
P YS+ P P S S+ PPP P++ G
Sbjct: 319 PYYSSPHSAPAPSSTSFSSAPPPPPYSSNG 348
>At4g08370.1 68417.m01382 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 350
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLPW 713
PP F PP ++ N+PPP P+
Sbjct: 96 PPPPPFVYSSPPPPTYIYNSPPPPPY 121
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLP 710
PP S PPP V S+ PPP P
Sbjct: 447 PPPSIHYSSPPPPPVHHSSPPPPSP 471
>At1g70990.1 68414.m08190 proline-rich family protein
Length = 176
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 633 VPPYSAFPDQPPPXSVFVSNTPPPLPWAVTGASY 734
+PP S P PPP S + PPPLP + SY
Sbjct: 91 IPPPSPPPPSPPPPS--QACPPPPLPPSPPKKSY 122
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTP-PPLP 710
PP + P PPP +SN P PP P
Sbjct: 676 PPSTPPPPPPPPPKANISNAPKPPAP 701
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLP 710
PP P QPPP + +PPP P
Sbjct: 1101 PPLPPPPSQPPPPPLSPPPSPPPPP 1125
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLPWAVTGASYP 737
PP P PPP +V +PPP P + YP
Sbjct: 393 PPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYP 426
>At3g11030.1 68416.m01331 expressed protein contains Pfam domain
PF03005: Arabidopsis proteins of unknown function
Length = 451
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPPLP 710
PP S P PPP S + PPP P
Sbjct: 68 PPTSPPPPSPPPPSPPPPSPPPPSP 92
>At1g66980.1 68414.m07616 protein kinase family protein /
glycerophosphoryl diester phosphodiesterase family
protein similar to leaf rust resistance kinase Lr10
GI:1680685 from [Triticum aestivum]; contains Pfam
profiles PF03009: Glycerophosphoryl diester
phosphodiesterase family, PF00069: Protein kinase domain
Length = 1109
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -1
Query: 357 ILQCNKRKTE*SHGICIL-L*IVNHSMSSEVHPS 259
+L C+ + T+ HGIC L + N S S EV+P+
Sbjct: 83 VLWCDVQLTKDGHGICFPDLNLANASNSEEVYPN 116
>At1g26240.1 68414.m03201 proline-rich extensin-like family protein
similar to hydroxyproline-rich glycoprotein precursor
gi|727264|gb|AAA87902; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 478
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 636 PPYSAFPDQPPPXSVFVSNTPPP 704
PPY + PPP V+ S +PPP
Sbjct: 433 PPY-VYSSPPPPPYVYKSPSPPP 454
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,717,356
Number of Sequences: 28952
Number of extensions: 281035
Number of successful extensions: 1381
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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