Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0128
(566 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 144 6e-35
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 46 2e-05
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 36 0.017
07_03_1689 + 28710936-28711129,28711283-28711341,28711858-287118... 30 1.1
09_01_0080 - 1168032-1168046,1168374-1168431,1168516-1168631,116... 29 2.0
11_03_0171 + 11111534-11113207 28 4.5
07_01_0355 + 2597592-2598280,2599150-2599426 28 4.5
09_06_0211 + 21601321-21601807,21601982-21602265,21603337-21603666 28 6.0
12_02_1124 + 26301884-26303725 27 7.9
06_03_0969 - 26413534-26413594,26415020-26415318 27 7.9
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 144 bits (348), Expect = 6e-35
Identities = 66/102 (64%), Positives = 79/102 (77%)
Frame = +2
Query: 251 QSAQEAWHAWAELPAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIH 430
++ +A W +PAP RGE+VRQIGDALR L LG+LVSLEMGKILPE IGEV E I
Sbjct: 89 RACYDAAKTWMAIPAPKRGEIVRQIGDALRAKLHHLGRLVSLEMGKILPEGIGEVQEIID 148
Query: 431 VCDLALGLSRTLPGTVFPSERPGHVLFEKWNPLGVVGIITAF 556
+CD A+GLSR L G++ PSERP H++ E WNPLGVVG+ITAF
Sbjct: 149 MCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAF 190
Score = 32.3 bits (70), Expect = 0.28
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 88 KYSFLKDLGLKENNVGVFN-GKWKANGEVIKSYSPANGK 201
++ FL +LGL N G F G W +G V+ S +P N +
Sbjct: 8 EHQFLAELGLAPRNPGSFACGAWGGSGPVVTSTNPTNNQ 46
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/101 (26%), Positives = 45/101 (44%)
Frame = +2
Query: 254 SAQEAWHAWAELPAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIHV 433
+A+ A+ W P R ++ + + +R N+ L + ++ E GK L +A G+V + V
Sbjct: 69 AARTAFPGWRNTPVTTRQRIMLKYQELIRANMDKLAENITTEQGKTLKDAWGDVFRGLEV 128
Query: 434 CDLALGLSRTLPGTVFPSERPGHVLFEKWNPLGVVGIITAF 556
+ A G+ G + G F PLGV I F
Sbjct: 129 VEHACGMGTLQMGEYVSNVSNGIDTFSIREPLGVCAGICPF 169
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 36.3 bits (80), Expect = 0.017
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Frame = +2
Query: 251 QSAQEAW-HA-WAELPAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEY 424
++A+EA+ H W + ARG ++ + D + ++++ L L +++ GK+ A+G++++
Sbjct: 63 KAAREAFDHGPWPRMSGFARGRILHKFADLVEQHVEELAALDTVDAGKLF--AMGKLVDI 120
Query: 425 IHVCDLA---LGLSRTLPGTVFPSERPGHVLFEKWNPLGVVGII 547
+L G + + G RP H K P+GVVG I
Sbjct: 121 PGGANLLRYYAGAADKVHGETLKMARPCHGYTLK-EPVGVVGHI 163
>07_03_1689 +
28710936-28711129,28711283-28711341,28711858-28711892,
28712123-28712226,28712325-28712397,28712495-28712553,
28712656-28712721,28712815-28712898,28712995-28713059,
28713152-28713342,28713522-28713612,28714076-28714134,
28714732-28714872,28715214-28715321
Length = 442
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/92 (26%), Positives = 37/92 (40%)
Frame = +2
Query: 242 GVRQSAQEAWHAWAELPAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIE 421
G+ + Q W++W V+R D N++ K L K P I ++ +
Sbjct: 57 GLALTPQMGWNSWNFFACNINETVIRDTDDCW-SNVKRGKKDQLLPDPKTFPSGIKDLAD 115
Query: 422 YIHVCDLALGLSRTLPGTVFPSERPGHVLFEK 517
Y+H L LG+ G RPG + EK
Sbjct: 116 YVHGKGLKLGIYSD-AGIFTCQVRPGSLHHEK 146
>09_01_0080 -
1168032-1168046,1168374-1168431,1168516-1168631,
1169310-1169368,1169832-1169880,1170314-1170378,
1170477-1170564,1171212-1171277
Length = 171
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 112 GLKENNVGVF---NGKWKANGEVIKSYSPANGKVIAEVQAGSAXIMRRA 249
GL N +F + WK E+ + S NGKVIA+V S +R +
Sbjct: 92 GLTGTNTSMFPEVDSTWKTFREIQRLLSKTNGKVIADVMTYSPLAVRES 140
>11_03_0171 + 11111534-11113207
Length = 557
Score = 28.3 bits (60), Expect = 4.5
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = -1
Query: 458 GTDPKLSHT-REYTRSLRR*LLAGFYPFLMTLAFQVAEGFPLEHLRFV*RPRLLQARAVP 282
G P+L H T LR L+G P +LA Q F L + P + RA P
Sbjct: 232 GVPPELGHLPATVTLDLRFNNLSGEIPQSGSLASQGPTAF-LNNPGLCGFPLQVPCRAAP 290
Query: 281 PTHATLPVPTGARLIIXA----LPACTSAITL 198
P+ +T P P+ A I A P TS I L
Sbjct: 291 PSSSTPPPPSAAGSISGAGGPRQPVKTSLIVL 322
>07_01_0355 + 2597592-2598280,2599150-2599426
Length = 321
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -1
Query: 212 SAITLPFAGL*DLITSPFAFHFPLKTPTLFSFKPKSFKNEYFGSSMRKAVDALR 51
S I+L FAG+ L+ + A F TP +K S+ +F +S+ DA++
Sbjct: 249 STISLGFAGMQVLVCTFVAVRFEGATPAEAIYKNLSYLEVFFKTSLLAVGDAVK 302
>09_06_0211 + 21601321-21601807,21601982-21602265,21603337-21603666
Length = 366
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 242 GVRQSAQEAWHAWAELPAPARGEVVRQ 322
G+ SA+EA WA+LPAP E Q
Sbjct: 67 GLSSSAEEARCLWAKLPAPEEEEEAGQ 93
>12_02_1124 + 26301884-26303725
Length = 613
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 389 ILPEAIGEVIEYIHVCDLALGLSRTLPGTVFPSERPG 499
+ P+AIGE+ + + LAL +R L G V PS G
Sbjct: 217 VFPKAIGELHGHSGIARLALFYARGLCGLVDPSHGTG 253
>06_03_0969 - 26413534-26413594,26415020-26415318
Length = 119
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 247 APVGTGSVACVGGTARACKRRGR*TNRRCSKGKPSATWKASVIRNG*NPA 396
AP G G+VA GG A RR + +A W++ G +PA
Sbjct: 10 APPGDGAVALAGGDEAAQGSPAAAARRRSRAARATARWRSRAAAQG-SPA 58
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,999,030
Number of Sequences: 37544
Number of extensions: 341972
Number of successful extensions: 1078
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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