Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0127
         (730 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p pro...    31   1.6  
AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-P...    31   1.6  
AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-P...    31   1.6  
BT010311-1|AAQ23629.1|  511|Drosophila melanogaster AT31519p pro...    29   4.9  
AE014134-2482|AAF53383.1|  511|Drosophila melanogaster CG15286-P...    29   4.9  
M61157-1|AAA28495.1| 1174|Drosophila melanogaster potassium chan...    29   6.5  
BT003261-1|AAO25018.1|  569|Drosophila melanogaster LD23656p pro...    29   6.5  
AE013599-1893|AAF58247.1|  569|Drosophila melanogaster CG10105-P...    29   6.5  
M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 cha...    29   8.6  
M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein ( Dros...    29   8.6  
BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p pro...    29   8.6  
AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA...    29   8.6  

>AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p
           protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 482 TNIDQTRHRXHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 354
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-PD,
           isoform D protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 482 TNIDQTRHRXHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 354
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-PA,
           isoform A protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 482 TNIDQTRHRXHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 354
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>BT010311-1|AAQ23629.1|  511|Drosophila melanogaster AT31519p
           protein.
          Length = 511

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 354 ILSTRGSSPWRPAADMGTNRXDISTYIPX*IFKAA 250
           ++ TR ++P +PAA++G N   I+ Y P   F  A
Sbjct: 316 VIRTRHANPAQPAANIGNNTRSINVYGPTSAFTQA 350


>AE014134-2482|AAF53383.1|  511|Drosophila melanogaster CG15286-PA
           protein.
          Length = 511

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 354 ILSTRGSSPWRPAADMGTNRXDISTYIPX*IFKAA 250
           ++ TR ++P +PAA++G N   I+ Y P   F  A
Sbjct: 316 VIRTRHANPAQPAANIGNNTRSINVYGPTSAFTQA 350


>M61157-1|AAA28495.1| 1174|Drosophila melanogaster potassium channel
           protein protein.
          Length = 1174

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 19/75 (25%), Positives = 33/75 (44%)
 Frame = -2

Query: 264 IFKAAESIRTPPQMRCSSRSEPYLPSIGFHGXRTLRQKRKLFPYLSAASSGHFGLPRRTL 85
           IF+    ++   ++    ++EP LP    H  R +  K +  P + A S    G   ++ 
Sbjct: 696 IFRRVADVKREKELAERRKNEPQLPQNQDHLVRKIFSKFRRTPQVQAGSKELVGGSGQSD 755

Query: 84  VFKDEGTIIETVPLP 40
           V K +G +  T  LP
Sbjct: 756 VEKGDGEVERTKVLP 770


>BT003261-1|AAO25018.1|  569|Drosophila melanogaster LD23656p
           protein.
          Length = 569

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -3

Query: 344 LEALHLGDLLRIWVRTGATSPRTSXPEFSRPQRVS 240
           LE  HL  LLRIW+++ ++SP  S    S P   S
Sbjct: 452 LERRHLKALLRIWLKSNSSSPSFSTGCTSAPINAS 486


>AE013599-1893|AAF58247.1|  569|Drosophila melanogaster CG10105-PA
           protein.
          Length = 569

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -3

Query: 344 LEALHLGDLLRIWVRTGATSPRTSXPEFSRPQRVS 240
           LE  HL  LLRIW+++ ++SP  S    S P   S
Sbjct: 452 LERRHLKALLRIWLKSNSSSPSFSTGCTSAPINAS 486


>M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 chain
           protein.
          Length = 1639

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 261 FKAAESIRTPPQMRCSSRSEPYLPSIGFHGXRTL 160
           F A   I    + +C+  +   +PS G HG RTL
Sbjct: 287 FYAISDIAVGARCKCNGHASKCVPSTGMHGERTL 320


>M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein (
           Drosophila mRNA forlaminin B2 chain. ).
          Length = 1639

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 261 FKAAESIRTPPQMRCSSRSEPYLPSIGFHGXRTL 160
           F A   I    + +C+  +   +PS G HG RTL
Sbjct: 287 FYAISDIAVGARCKCNGHASKCVPSTGMHGERTL 320


>BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p
           protein.
          Length = 1639

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 261 FKAAESIRTPPQMRCSSRSEPYLPSIGFHGXRTL 160
           F A   I    + +C+  +   +PS G HG RTL
Sbjct: 287 FYAISDIAVGARCKCNGHASKCVPSTGMHGERTL 320


>AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA
           protein.
          Length = 1639

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 261 FKAAESIRTPPQMRCSSRSEPYLPSIGFHGXRTL 160
           F A   I    + +C+  +   +PS G HG RTL
Sbjct: 287 FYAISDIAVGARCKCNGHASKCVPSTGMHGERTL 320


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,621,272
Number of Sequences: 53049
Number of extensions: 748247
Number of successful extensions: 2031
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2029
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)