Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0126
         (595 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041144-1|AAH41144.1|  511|Homo sapiens chromosome 2 open readi...    52   1e-06
AC127383-1|AAY24008.1|  207|Homo sapiens unknown protein.              52   1e-06
AB065523-1|BAC05771.1|  290|Homo sapiens seven transmembrane hel...    29   9.4  

>BC041144-1|AAH41144.1|  511|Homo sapiens chromosome 2 open reading
           frame 13 protein.
          Length = 511

 Score = 52.4 bits (120), Expect = 1e-06
 Identities = 28/73 (38%), Positives = 37/73 (50%)
 Frame = +3

Query: 30  DMRVSRNHAXIEVTDTCVILKSLHQNPCFYIDKLSNSKRTLTQNNAQLLCNGDKFGILPD 209
           D RVSR HA +EV    + +K +H NPCFY     +    L  N    L  GD F +L D
Sbjct: 35  DKRVSRRHAILEVAGGQLRIKPIHTNPCFYQSSEKSQLLPLKPNLWCYLNPGDSFSLLVD 94

Query: 210 TYWFELIWCSSDV 248
            Y F ++   S+V
Sbjct: 95  KYIFRILSIPSEV 107


>AC127383-1|AAY24008.1|  207|Homo sapiens unknown protein.
          Length = 207

 Score = 52.4 bits (120), Expect = 1e-06
 Identities = 28/73 (38%), Positives = 37/73 (50%)
 Frame = +3

Query: 30  DMRVSRNHAXIEVTDTCVILKSLHQNPCFYIDKLSNSKRTLTQNNAQLLCNGDKFGILPD 209
           D RVSR HA +EV    + +K +H NPCFY     +    L  N    L  GD F +L D
Sbjct: 35  DKRVSRRHAILEVAGGQLRIKPIHTNPCFYQSSEKSQLLPLKPNLWCYLNPGDSFSLLVD 94

Query: 210 TYWFELIWCSSDV 248
            Y F ++   S+V
Sbjct: 95  KYIFRILSIPSEV 107


>AB065523-1|BAC05771.1|  290|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 290

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 13/61 (21%), Positives = 33/61 (54%)
 Frame = -2

Query: 273 LLLVTSFSSHLMSTILIQTNMYQVVYQIYHHYIAIVHYSVLMSVCCLIICQYRNMDFGVK 94
           LL++ S+S  L+ ++     ++ ++ Q + H++ +  + +L +VC L       + +G+ 
Sbjct: 214 LLILVSYSFILVISMFYLPGIFTIITQRFGHHVPLHTHILLANVCVLAPPMLNPIIYGIN 273

Query: 93  T 91
           T
Sbjct: 274 T 274


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,276,958
Number of Sequences: 237096
Number of extensions: 1248687
Number of successful extensions: 3112
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3112
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)