Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0126
         (595 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ...    32   0.27 
Z81587-2|CAB04702.2|  339|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AF099922-1|AAK21410.2|  509|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z68001-2|CAA91973.2|  130|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z48006-5|CAA88049.1|  251|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81517-7|CAE11306.1|  329|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AC006833-8|AAF60944.1|  360|Caenorhabditis elegans Hypothetical ...    28   5.8  
Z93380-1|CAB07598.2|  337|Caenorhabditis elegans Hypothetical pr...    27   7.6  
Z48009-9|CAA88085.1|  329|Caenorhabditis elegans Hypothetical pr...    27   7.6  
AC006742-6|AAF60498.1|  778|Caenorhabditis elegans Hypothetical ...    27   7.6  
AC006742-3|AAF60501.1|  778|Caenorhabditis elegans Hypothetical ...    27   7.6  

>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
           protein F52C12.4 protein.
          Length = 1635

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +3

Query: 27  EDMRVSRNHAXIEVTDTCVILKSLHQNPCFYIDKLS-NSKRTLTQNNAQLLCNGDKFGIL 203
           E+ ++S      +  DT ++     +   F+I K S NSK+ L      + C+ +   IL
Sbjct: 730 ENSKISPKRGNSKAADTLLVFGKFSEKYIFFITKTSVNSKKWLKNRRKHVFCD-ENLNIL 788

Query: 204 PDTYW 218
           P   W
Sbjct: 789 PKPLW 793


>Z81587-2|CAB04702.2|  339|Caenorhabditis elegans Hypothetical
           protein T06G6.2 protein.
          Length = 339

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -2

Query: 288 LSAGVLLLVTSFSSHLMSTILIQTNMYQVVYQIYHHYIAIVHYSVLMSVCCLIICQY 118
           L  G+ ++VT F  +L  ++  +  + Q  Y     YIA  + +   SVC LI+ Q+
Sbjct: 202 LIMGICIIVTVFVYYL--SVKSEKQIQQTSYSPGERYIAYENVAASQSVCILIVLQF 256


>AF099922-1|AAK21410.2|  509|Caenorhabditis elegans Hypothetical
           protein F56F11.5 protein.
          Length = 509

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/67 (19%), Positives = 32/67 (47%)
 Frame = -2

Query: 342 VSFKLYSCVALNSLGISLLSAGVLLLVTSFSSHLMSTILIQTNMYQVVYQIYHHYIAIVH 163
           +S ++  CV   +  +S L +   +    F  H++  ++    M+  ++  +   +A+VH
Sbjct: 303 ISLEILYCVLFITATVSTLRSLEFIKSLGFFVHILKKMMKTVGMFVFIFCTFWFVLAVVH 362

Query: 162 YSVLMSV 142
            S+  S+
Sbjct: 363 VSISRSM 369


>Z68001-2|CAA91973.2|  130|Caenorhabditis elegans Hypothetical
           protein C11G10.1 protein.
          Length = 130

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -2

Query: 327 YSCVALNSLGISLLSAGVLLLVTSFSSH 244
           Y C+ + +L I++ SAG+ LL+ S+  H
Sbjct: 13  YLCLTITALLIAVFSAGLTLLIASYMYH 40


>Z48006-5|CAA88049.1|  251|Caenorhabditis elegans Hypothetical
           protein F19C6.5 protein.
          Length = 251

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -2

Query: 267 LVTSFSSHLMSTILIQTNMYQVVYQIYHHYIAIVH 163
           L+    +   +++LI  N+  + YQ+YH Y ++ H
Sbjct: 209 LIADVITTYATSLLILANISSIGYQLYHEYFSLEH 243


>Z81517-7|CAE11306.1|  329|Caenorhabditis elegans Hypothetical
           protein F28B1.8 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
 Frame = -2

Query: 375 SPSSTVSCKPFVSFKLYSCVALNSLGISLLSAGVLLL--VTSFSSHLMSTILIQTNMYQV 202
           +P + VS K ++   L+ C  L  LG+++LSA  L+L  +  F   ++ TI     ++Q 
Sbjct: 35  TPKTMVSIK-WILLNLHVCCLLFDLGLTVLSAPCLILPAMAGFPLGILWTIFEVPIIFQ- 92

Query: 201 VYQIYHHYIAIVHYSVLM 148
            Y I+   + + +  ++M
Sbjct: 93  TYLIFTSLLMVCNAILVM 110


>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
            C23F12.1b protein.
          Length = 2747

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 18/61 (29%), Positives = 31/61 (50%)
 Frame = -2

Query: 411  FSSDCSFNVCGASPSSTVSCKPFVSFKLYSCVALNSLGISLLSAGVLLLVTSFSSHLMST 232
            FS++  FN    SP+S      F  F++ SC+    +     +  + ++ T+ SSHL+S 
Sbjct: 1962 FSNNAEFN----SPNSDKYSNHFQIFQIRSCLCACFVLFIFFNFKIHVIFTTLSSHLISF 2017

Query: 231  I 229
            I
Sbjct: 2018 I 2018


>AC006833-8|AAF60944.1|  360|Caenorhabditis elegans Hypothetical
           protein ZK616.8 protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 3/79 (3%)
 Frame = +2

Query: 254 NDVTSNSTPADNKEIPNELRATQEYNLNETNGLQETVEEG---EAPQTXXXXXXXXXXXX 424
           N + S       K  PNE RATQ  + N  +G  E V  G    +PQ             
Sbjct: 257 NQIESEMDSFVKKIEPNERRATQYNHSNSLSGSNEAVPPGNVKRSPQKATHPIRTTRSLI 316

Query: 425 XXXXXXDEIVGKRSMTSED 481
                 + +  K S TS D
Sbjct: 317 GLDGETEAVYSKTSKTSPD 335


>Z93380-1|CAB07598.2|  337|Caenorhabditis elegans Hypothetical
           protein F28C12.1 protein.
          Length = 337

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = -2

Query: 270 LLVTSFSSHLMSTILIQTNMYQVVYQIYHHYIAIVHYSVLMSVCCLIICQYRNM---DFG 100
           ++VT F  +L  ++  +  +++  Y     YIA  + +   SVC LI+ Q+  +    FG
Sbjct: 206 IIVTIFIYYL--SVKSEKQIHRTSYSPGERYIACENVATSQSVCILIVLQFACIMLSSFG 263

Query: 99  VKTLR 85
           V  +R
Sbjct: 264 VNYIR 268


>Z48009-9|CAA88085.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.12 protein.
          Length = 329

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 228 LIQTNMYQVVYQIYHHYIAIVHYSVLMSVCCLIICQ 121
           +   N+YQ+VY I    I   H+ +   VC L+I +
Sbjct: 63  IFYANLYQIVYSIDVVVILYKHFFMQEEVCSLLILE 98


>AC006742-6|AAF60498.1|  778|Caenorhabditis elegans Hypothetical
           protein Y38C1AB.2 protein.
          Length = 778

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 15/69 (21%), Positives = 31/69 (44%)
 Frame = -2

Query: 348 PFVSFKLYSCVALNSLGISLLSAGVLLLVTSFSSHLMSTILIQTNMYQVVYQIYHHYIAI 169
           P +   LY CV      +S L     +    F  H++  ++    M+ V++  +   +A+
Sbjct: 380 PIILEILY-CVLFTIATVSTLRFFEFMKSLGFFIHILKKMIKTVLMFVVIFCTFWFVLAV 438

Query: 168 VHYSVLMSV 142
           +H S+  S+
Sbjct: 439 IHVSISRSI 447


>AC006742-3|AAF60501.1|  778|Caenorhabditis elegans Hypothetical
           protein Y38C1AB.6 protein.
          Length = 778

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 15/69 (21%), Positives = 31/69 (44%)
 Frame = -2

Query: 348 PFVSFKLYSCVALNSLGISLLSAGVLLLVTSFSSHLMSTILIQTNMYQVVYQIYHHYIAI 169
           P +   LY CV      +S L     +    F  H++  ++    M+ V++  +   +A+
Sbjct: 380 PIILEILY-CVLFTIATVSTLRFFEFMKSLGFFIHILKKMIKTVLMFVVIFCTFWFVLAV 438

Query: 168 VHYSVLMSV 142
           +H S+  S+
Sbjct: 439 IHVSISRSI 447


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,551,336
Number of Sequences: 27780
Number of extensions: 213370
Number of successful extensions: 710
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)