BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0122 (261 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 70 3e-13 AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 50 3e-07 AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 36 0.003 AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 36 0.003 U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 33 0.021 Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 33 0.028 Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 33 0.037 AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 33 0.037 AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 33 0.037 AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 30 0.26 Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 29 0.45 Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 29 0.45 L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 29 0.45 Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 28 0.79 Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 28 1.1 Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 28 1.1 Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 26 3.2 AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 26 3.2 Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical p... 26 4.2 Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical pr... 26 4.2 Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical pr... 26 4.2 AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical ... 26 4.2 AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A ... 26 4.2 AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B ... 26 4.2 Z81104-7|CAB70253.2| 647|Caenorhabditis elegans Hypothetical pr... 25 5.6 Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 25 7.4 Z82093-7|CAB05021.1| 226|Caenorhabditis elegans Hypothetical pr... 25 7.4 Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 25 7.4 Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical pr... 25 7.4 U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 25 7.4 U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 25 9.8 AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 25 9.8 >U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regulatory particle,atpase-like protein 3 protein. Length = 414 Score = 69.7 bits (163), Expect = 3e-13 Identities = 31/44 (70%), Positives = 38/44 (86%) Frame = -3 Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKD 125 S +VDLE++VARPD++SGADIN+ICQEAG AVRENRY+ KD Sbjct: 351 SDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKD 394 >AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome regulatory particle,atpase-like protein 2 protein. Length = 443 Score = 49.6 bits (113), Expect = 3e-07 Identities = 23/43 (53%), Positives = 29/43 (67%) Frame = -3 Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKDF 122 EV+LEEF+ D +SGADI A+C EAG A+RE R +DF Sbjct: 380 EVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDF 422 >AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome regulatory particle,atpase-like protein 4, isoform b protein. Length = 398 Score = 36.3 bits (80), Expect = 0.003 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = -3 Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKDF 122 E+D E V D S AD+ +C EAG A+R R +DF Sbjct: 334 EIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDF 376 >AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome regulatory particle,atpase-like protein 4, isoform a protein. Length = 406 Score = 36.3 bits (80), Expect = 0.003 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = -3 Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKDF 122 E+D E V D S AD+ +C EAG A+R R +DF Sbjct: 342 EIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDF 384 >U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical protein C10G11.8 protein. Length = 438 Score = 33.5 bits (73), Expect = 0.021 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 Query: 247 VDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKDF 122 V E + + +SGA+I A+C EAG A+R R DF Sbjct: 376 VTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTDDF 417 >Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical protein C52E4.4 protein. Length = 435 Score = 33.1 bits (72), Expect = 0.028 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Frame = -3 Query: 256 SIEVDLE-EFVARP-DRVSGADINAICQEAGXHAVRENRYMXRPKDF 122 S+E D+ + +AR +GA+I ++C EAG A+R R + KDF Sbjct: 365 SVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDF 411 >Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical protein Y49E10.1 protein. Length = 416 Score = 32.7 bits (71), Expect = 0.037 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 208 SGADINAICQEAGXHAVRENRYMXRPKDF 122 SGA++ ++C EAG A+RE R +DF Sbjct: 365 SGAEVKSVCTEAGMFALRERRIHVTQEDF 393 >AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical protein F56F11.4a protein. Length = 411 Score = 32.7 bits (71), Expect = 0.037 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 208 SGADINAICQEAGXHAVRENRYMXRPKDF 122 SGA++ ++C EAG A+RE R +DF Sbjct: 360 SGAEVKSVCTEAGMFALRERRIHVTQEDF 388 >AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical protein F56F11.4b protein. Length = 432 Score = 32.7 bits (71), Expect = 0.037 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 208 SGADINAICQEAGXHAVRENRYMXRPKDF 122 SGA++ ++C EAG A+RE R +DF Sbjct: 381 SGAEVKSVCTEAGMFALRERRIHVTQEDF 409 >AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome regulatory particle,atpase-like protein 5 protein. Length = 430 Score = 29.9 bits (64), Expect = 0.26 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -3 Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKDF 122 +V+ EE D +GA A+C EAG A+R + +DF Sbjct: 369 DVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDF 411 >Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical protein T01G9.5b protein. Length = 475 Score = 29.1 bits (62), Expect = 0.45 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = -3 Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVR 155 S E++ ++ AR + SGAD+ ++C+ A + +R Sbjct: 381 SDEINYDDLAARTEGFSGADVVSLCRTAAINVLR 414 >Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical protein T01G9.5a protein. Length = 472 Score = 29.1 bits (62), Expect = 0.45 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = -3 Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVR 155 S E++ ++ AR + SGAD+ ++C+ A + +R Sbjct: 381 SDEINYDDLAARTEGFSGADVVSLCRTAAINVLR 414 >L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. Length = 472 Score = 29.1 bits (62), Expect = 0.45 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = -3 Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVR 155 S E++ ++ AR + SGAD+ ++C+ A + +R Sbjct: 381 SDEINYDDLAARTEGFSGADVVSLCRTAAINVLR 414 >Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical protein C06A1.1 protein. Length = 809 Score = 28.3 bits (60), Expect = 0.79 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -3 Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRE 152 +VDLE+ GAD+ ++C EA +RE Sbjct: 399 DVDLEQIANECHGFVGADLASLCSEAALQQIRE 431 Score = 26.6 bits (56), Expect = 2.4 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -3 Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVREN 149 S ++DL SGAD+ ICQ A A+RE+ Sbjct: 674 SKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRES 709 >Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical protein C41C4.8 protein. Length = 810 Score = 27.9 bits (59), Expect = 1.1 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -3 Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRE 152 +VDLE+ GAD+ ++C EA +RE Sbjct: 398 DVDLEQVANECHGFVGADLASLCSEAAIQQIRE 430 Score = 27.9 bits (59), Expect = 1.1 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -3 Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVREN 149 S ++DL SGAD+ ICQ A A+RE+ Sbjct: 672 SADLDLNFLAKNTVGFSGADLTEICQRACKLAIRES 707 >Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical protein C41C4.8 protein. Length = 810 Score = 27.9 bits (59), Expect = 1.1 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -3 Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRE 152 +VDLE+ GAD+ ++C EA +RE Sbjct: 398 DVDLEQVANECHGFVGADLASLCSEAAIQQIRE 430 Score = 27.9 bits (59), Expect = 1.1 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -3 Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVREN 149 S ++DL SGAD+ ICQ A A+RE+ Sbjct: 672 SADLDLNFLAKNTVGFSGADLTEICQRACKLAIRES 707 >Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical protein K04G2.3 protein. Length = 724 Score = 26.2 bits (55), Expect = 3.2 Identities = 10/31 (32%), Positives = 20/31 (64%) Frame = -3 Query: 241 LEEFVARPDRVSGADINAICQEAGXHAVREN 149 +++ V + SGA++ A+C+ A A+RE+ Sbjct: 653 IDKLVEKTSGYSGAELVAVCRTAAMFAMRES 683 >AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (spastic paraplegia)protein 7 protein. Length = 782 Score = 26.2 bits (55), Expect = 3.2 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -3 Query: 208 SGADINAICQEAGXHAVRENRYMXRPKDF 122 SGADI+ +C EA A R+ + K F Sbjct: 502 SGADISNVCNEAALIAARDANHEISNKHF 530 >Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical protein R11G10.1a protein. Length = 657 Score = 25.8 bits (54), Expect = 4.2 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -1 Query: 240 WKSSWLDRTACPA 202 W S W+DRTA PA Sbjct: 485 WVSFWIDRTAVPA 497 >Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical protein R11G10.1b protein. Length = 478 Score = 25.8 bits (54), Expect = 4.2 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -1 Query: 240 WKSSWLDRTACPA 202 W S W+DRTA PA Sbjct: 306 WVSFWIDRTAVPA 318 >Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical protein R11G10.1a protein. Length = 657 Score = 25.8 bits (54), Expect = 4.2 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -1 Query: 240 WKSSWLDRTACPA 202 W S W+DRTA PA Sbjct: 485 WVSFWIDRTAVPA 497 >AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical protein Y6B3B.9 protein. Length = 485 Score = 25.8 bits (54), Expect = 4.2 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Frame = -1 Query: 252 LKWIWKSSWLD--RTACPAPTSTPSVRRP 172 L W+WK+ WL R A + +T S + P Sbjct: 153 LDWLWKNFWLSDARVAMNSAAATNSSKNP 181 >AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A protein protein. Length = 657 Score = 25.8 bits (54), Expect = 4.2 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -1 Query: 240 WKSSWLDRTACPA 202 W S W+DRTA PA Sbjct: 485 WVSFWIDRTAVPA 497 >AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B protein protein. Length = 478 Score = 25.8 bits (54), Expect = 4.2 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -1 Query: 240 WKSSWLDRTACPA 202 W S W+DRTA PA Sbjct: 306 WVSFWIDRTAVPA 318 >Z81104-7|CAB70253.2| 647|Caenorhabditis elegans Hypothetical protein M199.3 protein. Length = 647 Score = 25.4 bits (53), Expect = 5.6 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -1 Query: 243 IWKSSWLDRTACPAPTSTPSVRRP 172 IWK ++ + ACP TS V+RP Sbjct: 115 IWKFTFTLKYACPITTSYVFVQRP 138 >Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical protein F11A5.10 protein. Length = 461 Score = 25.0 bits (52), Expect = 7.4 Identities = 9/13 (69%), Positives = 9/13 (69%) Frame = -1 Query: 240 WKSSWLDRTACPA 202 W S W DRTA PA Sbjct: 293 WVSFWFDRTAIPA 305 >Z82093-7|CAB05021.1| 226|Caenorhabditis elegans Hypothetical protein ZK39.8 protein. Length = 226 Score = 25.0 bits (52), Expect = 7.4 Identities = 10/33 (30%), Positives = 14/33 (42%) Frame = -1 Query: 249 KWIWKSSWLDRTACPAPTSTPSVRRPAXTLSGK 151 KW W+++ LD C P + R GK Sbjct: 190 KWTWQANRLDDVQCQVPAGSNVARTVRGYACGK 222 >Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical protein F43G9.10 protein. Length = 466 Score = 25.0 bits (52), Expect = 7.4 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -2 Query: 236 RVRGSTGPRVRRRHQRHLSGGRXARCQGKQIHG 138 R R S+ RRRH+RH GR + + ++ G Sbjct: 81 RRRESSDEEDRRRHRRHEDYGRRRQVEKPEVLG 113 >Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical protein F48F7.4 protein. Length = 925 Score = 25.0 bits (52), Expect = 7.4 Identities = 7/14 (50%), Positives = 12/14 (85%) Frame = -1 Query: 240 WKSSWLDRTACPAP 199 ++++WLD T+CP P Sbjct: 763 FQNTWLDATSCPLP 776 >U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sensitive glutamate-gated chloride channel GluCl alpha protein. Length = 461 Score = 25.0 bits (52), Expect = 7.4 Identities = 9/13 (69%), Positives = 9/13 (69%) Frame = -1 Query: 240 WKSSWLDRTACPA 202 W S W DRTA PA Sbjct: 293 WVSFWFDRTAIPA 305 >U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein F35A5.1 protein. Length = 1274 Score = 24.6 bits (51), Expect = 9.8 Identities = 11/33 (33%), Positives = 13/33 (39%) Frame = -1 Query: 240 WKSSWLDRTACPAPTSTPSVRRPAXTLSGKTDT 142 WK W D A P S P + L+ K T Sbjct: 673 WKPPWEDDDAPAKPVSLPEPEKKTPVLAKKAPT 705 >AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical protein F32D1.1 protein. Length = 594 Score = 24.6 bits (51), Expect = 9.8 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = -3 Query: 244 DLEEFVARPDRVSGADINAICQEAGXHAVRE 152 +LE D SGAD+ +C EA +R+ Sbjct: 507 NLERIRELTDGYSGADMRQLCTEAAMGPIRD 537 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 4,149,124 Number of Sequences: 27780 Number of extensions: 51529 Number of successful extensions: 216 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 205 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 216 length of database: 12,740,198 effective HSP length: 65 effective length of database: 10,934,498 effective search space used: 229624458 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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