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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0122
         (261 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12965-4|AAA20608.1|  414|Caenorhabditis elegans Proteasome regu...    70   3e-13
AF016440-3|AAB65906.1|  443|Caenorhabditis elegans Proteasome re...    50   3e-07
AF024493-9|AAV58871.1|  398|Caenorhabditis elegans Proteasome re...    36   0.003
AF024493-8|AAB70326.2|  406|Caenorhabditis elegans Proteasome re...    36   0.003
U88170-1|AAB42248.2|  438|Caenorhabditis elegans Hypothetical pr...    33   0.021
Z78012-4|CAB01414.1|  435|Caenorhabditis elegans Hypothetical pr...    33   0.028
Z98866-1|CAB11558.1|  416|Caenorhabditis elegans Hypothetical pr...    33   0.037
AF099922-3|AAK21407.2|  411|Caenorhabditis elegans Hypothetical ...    33   0.037
AF099922-2|AAM48537.1|  432|Caenorhabditis elegans Hypothetical ...    33   0.037
AF067618-3|AAC19196.1|  430|Caenorhabditis elegans Proteasome re...    30   0.26 
Z75713-7|CAD56596.1|  475|Caenorhabditis elegans Hypothetical pr...    29   0.45 
Z75713-6|CAB00052.1|  472|Caenorhabditis elegans Hypothetical pr...    29   0.45 
L25423-1|AAA28109.1|  472|Caenorhabditis elegans mei-1 protein.        29   0.45 
Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical pr...    28   0.79 
Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical pr...    28   1.1  
Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical p...    28   1.1  
Z75712-1|CAB00040.1|  724|Caenorhabditis elegans Hypothetical pr...    26   3.2  
AC024791-6|AAF60660.2|  782|Caenorhabditis elegans Human spg (sp...    26   3.2  
Z81118-10|CAB61029.1|  657|Caenorhabditis elegans Hypothetical p...    26   4.2  
Z81118-1|CAB03329.1|  478|Caenorhabditis elegans Hypothetical pr...    26   4.2  
Z77668-2|CAB61021.1|  657|Caenorhabditis elegans Hypothetical pr...    26   4.2  
AL032655-4|CAB63413.2|  485|Caenorhabditis elegans Hypothetical ...    26   4.2  
AJ000538-1|CAA04171.1|  657|Caenorhabditis elegans GluClalpha2A ...    26   4.2  
AJ000537-1|CAA04170.1|  478|Caenorhabditis elegans GluClalpha2B ...    26   4.2  
Z81104-7|CAB70253.2|  647|Caenorhabditis elegans Hypothetical pr...    25   5.6  
Z92830-9|CAB07361.2|  461|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z82093-7|CAB05021.1|  226|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z79755-7|CAB02103.1|  466|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z69661-2|CAA93494.1|  925|Caenorhabditis elegans Hypothetical pr...    25   7.4  
U14524-1|AAA50785.1|  461|Caenorhabditis elegans avermectin-sens...    25   7.4  
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr...    25   9.8  
AF016427-1|AAB65351.1|  594|Caenorhabditis elegans Hypothetical ...    25   9.8  

>U12965-4|AAA20608.1|  414|Caenorhabditis elegans Proteasome
           regulatory particle,atpase-like protein 3 protein.
          Length = 414

 Score = 69.7 bits (163), Expect = 3e-13
 Identities = 31/44 (70%), Positives = 38/44 (86%)
 Frame = -3

Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKD 125
           S +VDLE++VARPD++SGADIN+ICQEAG  AVRENRY+   KD
Sbjct: 351 SDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKD 394


>AF016440-3|AAB65906.1|  443|Caenorhabditis elegans Proteasome
           regulatory particle,atpase-like protein 2 protein.
          Length = 443

 Score = 49.6 bits (113), Expect = 3e-07
 Identities = 23/43 (53%), Positives = 29/43 (67%)
 Frame = -3

Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKDF 122
           EV+LEEF+   D +SGADI A+C EAG  A+RE R     +DF
Sbjct: 380 EVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDF 422


>AF024493-9|AAV58871.1|  398|Caenorhabditis elegans Proteasome
           regulatory particle,atpase-like protein 4, isoform b
           protein.
          Length = 398

 Score = 36.3 bits (80), Expect = 0.003
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -3

Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKDF 122
           E+D E  V   D  S AD+  +C EAG  A+R  R     +DF
Sbjct: 334 EIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDF 376


>AF024493-8|AAB70326.2|  406|Caenorhabditis elegans Proteasome
           regulatory particle,atpase-like protein 4, isoform a
           protein.
          Length = 406

 Score = 36.3 bits (80), Expect = 0.003
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -3

Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKDF 122
           E+D E  V   D  S AD+  +C EAG  A+R  R     +DF
Sbjct: 342 EIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDF 384


>U88170-1|AAB42248.2|  438|Caenorhabditis elegans Hypothetical
           protein C10G11.8 protein.
          Length = 438

 Score = 33.5 bits (73), Expect = 0.021
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -3

Query: 247 VDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKDF 122
           V  E  + +   +SGA+I A+C EAG  A+R  R      DF
Sbjct: 376 VTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTDDF 417


>Z78012-4|CAB01414.1|  435|Caenorhabditis elegans Hypothetical
           protein C52E4.4 protein.
          Length = 435

 Score = 33.1 bits (72), Expect = 0.028
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = -3

Query: 256 SIEVDLE-EFVARP-DRVSGADINAICQEAGXHAVRENRYMXRPKDF 122
           S+E D+  + +AR     +GA+I ++C EAG  A+R  R +   KDF
Sbjct: 365 SVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDF 411


>Z98866-1|CAB11558.1|  416|Caenorhabditis elegans Hypothetical
           protein Y49E10.1 protein.
          Length = 416

 Score = 32.7 bits (71), Expect = 0.037
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 208 SGADINAICQEAGXHAVRENRYMXRPKDF 122
           SGA++ ++C EAG  A+RE R     +DF
Sbjct: 365 SGAEVKSVCTEAGMFALRERRIHVTQEDF 393


>AF099922-3|AAK21407.2|  411|Caenorhabditis elegans Hypothetical
           protein F56F11.4a protein.
          Length = 411

 Score = 32.7 bits (71), Expect = 0.037
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 208 SGADINAICQEAGXHAVRENRYMXRPKDF 122
           SGA++ ++C EAG  A+RE R     +DF
Sbjct: 360 SGAEVKSVCTEAGMFALRERRIHVTQEDF 388


>AF099922-2|AAM48537.1|  432|Caenorhabditis elegans Hypothetical
           protein F56F11.4b protein.
          Length = 432

 Score = 32.7 bits (71), Expect = 0.037
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 208 SGADINAICQEAGXHAVRENRYMXRPKDF 122
           SGA++ ++C EAG  A+RE R     +DF
Sbjct: 381 SGAEVKSVCTEAGMFALRERRIHVTQEDF 409


>AF067618-3|AAC19196.1|  430|Caenorhabditis elegans Proteasome
           regulatory particle,atpase-like protein 5 protein.
          Length = 430

 Score = 29.9 bits (64), Expect = 0.26
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKDF 122
           +V+ EE     D  +GA   A+C EAG  A+R +      +DF
Sbjct: 369 DVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDF 411


>Z75713-7|CAD56596.1|  475|Caenorhabditis elegans Hypothetical
           protein T01G9.5b protein.
          Length = 475

 Score = 29.1 bits (62), Expect = 0.45
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -3

Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVR 155
           S E++ ++  AR +  SGAD+ ++C+ A  + +R
Sbjct: 381 SDEINYDDLAARTEGFSGADVVSLCRTAAINVLR 414


>Z75713-6|CAB00052.1|  472|Caenorhabditis elegans Hypothetical
           protein T01G9.5a protein.
          Length = 472

 Score = 29.1 bits (62), Expect = 0.45
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -3

Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVR 155
           S E++ ++  AR +  SGAD+ ++C+ A  + +R
Sbjct: 381 SDEINYDDLAARTEGFSGADVVSLCRTAAINVLR 414


>L25423-1|AAA28109.1|  472|Caenorhabditis elegans mei-1 protein.
          Length = 472

 Score = 29.1 bits (62), Expect = 0.45
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -3

Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVR 155
           S E++ ++  AR +  SGAD+ ++C+ A  + +R
Sbjct: 381 SDEINYDDLAARTEGFSGADVVSLCRTAAINVLR 414


>Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical
           protein C06A1.1 protein.
          Length = 809

 Score = 28.3 bits (60), Expect = 0.79
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRE 152
           +VDLE+         GAD+ ++C EA    +RE
Sbjct: 399 DVDLEQIANECHGFVGADLASLCSEAALQQIRE 431



 Score = 26.6 bits (56), Expect = 2.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVREN 149
           S ++DL          SGAD+  ICQ A   A+RE+
Sbjct: 674 SKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRES 709


>Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRE 152
           +VDLE+         GAD+ ++C EA    +RE
Sbjct: 398 DVDLEQVANECHGFVGADLASLCSEAAIQQIRE 430



 Score = 27.9 bits (59), Expect = 1.1
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVREN 149
           S ++DL          SGAD+  ICQ A   A+RE+
Sbjct: 672 SADLDLNFLAKNTVGFSGADLTEICQRACKLAIRES 707


>Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRE 152
           +VDLE+         GAD+ ++C EA    +RE
Sbjct: 398 DVDLEQVANECHGFVGADLASLCSEAAIQQIRE 430



 Score = 27.9 bits (59), Expect = 1.1
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVREN 149
           S ++DL          SGAD+  ICQ A   A+RE+
Sbjct: 672 SADLDLNFLAKNTVGFSGADLTEICQRACKLAIRES 707


>Z75712-1|CAB00040.1|  724|Caenorhabditis elegans Hypothetical
           protein K04G2.3 protein.
          Length = 724

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = -3

Query: 241 LEEFVARPDRVSGADINAICQEAGXHAVREN 149
           +++ V +    SGA++ A+C+ A   A+RE+
Sbjct: 653 IDKLVEKTSGYSGAELVAVCRTAAMFAMRES 683


>AC024791-6|AAF60660.2|  782|Caenorhabditis elegans Human spg
           (spastic paraplegia)protein 7 protein.
          Length = 782

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 208 SGADINAICQEAGXHAVRENRYMXRPKDF 122
           SGADI+ +C EA   A R+  +    K F
Sbjct: 502 SGADISNVCNEAALIAARDANHEISNKHF 530


>Z81118-10|CAB61029.1|  657|Caenorhabditis elegans Hypothetical
           protein R11G10.1a protein.
          Length = 657

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 240 WKSSWLDRTACPA 202
           W S W+DRTA PA
Sbjct: 485 WVSFWIDRTAVPA 497


>Z81118-1|CAB03329.1|  478|Caenorhabditis elegans Hypothetical
           protein R11G10.1b protein.
          Length = 478

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 240 WKSSWLDRTACPA 202
           W S W+DRTA PA
Sbjct: 306 WVSFWIDRTAVPA 318


>Z77668-2|CAB61021.1|  657|Caenorhabditis elegans Hypothetical
           protein R11G10.1a protein.
          Length = 657

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 240 WKSSWLDRTACPA 202
           W S W+DRTA PA
Sbjct: 485 WVSFWIDRTAVPA 497


>AL032655-4|CAB63413.2|  485|Caenorhabditis elegans Hypothetical
           protein Y6B3B.9 protein.
          Length = 485

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -1

Query: 252 LKWIWKSSWLD--RTACPAPTSTPSVRRP 172
           L W+WK+ WL   R A  +  +T S + P
Sbjct: 153 LDWLWKNFWLSDARVAMNSAAATNSSKNP 181


>AJ000538-1|CAA04171.1|  657|Caenorhabditis elegans GluClalpha2A
           protein protein.
          Length = 657

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 240 WKSSWLDRTACPA 202
           W S W+DRTA PA
Sbjct: 485 WVSFWIDRTAVPA 497


>AJ000537-1|CAA04170.1|  478|Caenorhabditis elegans GluClalpha2B
           protein protein.
          Length = 478

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 240 WKSSWLDRTACPA 202
           W S W+DRTA PA
Sbjct: 306 WVSFWIDRTAVPA 318


>Z81104-7|CAB70253.2|  647|Caenorhabditis elegans Hypothetical
           protein M199.3 protein.
          Length = 647

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 243 IWKSSWLDRTACPAPTSTPSVRRP 172
           IWK ++  + ACP  TS   V+RP
Sbjct: 115 IWKFTFTLKYACPITTSYVFVQRP 138


>Z92830-9|CAB07361.2|  461|Caenorhabditis elegans Hypothetical
           protein F11A5.10 protein.
          Length = 461

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 240 WKSSWLDRTACPA 202
           W S W DRTA PA
Sbjct: 293 WVSFWFDRTAIPA 305


>Z82093-7|CAB05021.1|  226|Caenorhabditis elegans Hypothetical
           protein ZK39.8 protein.
          Length = 226

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = -1

Query: 249 KWIWKSSWLDRTACPAPTSTPSVRRPAXTLSGK 151
           KW W+++ LD   C  P  +   R       GK
Sbjct: 190 KWTWQANRLDDVQCQVPAGSNVARTVRGYACGK 222


>Z79755-7|CAB02103.1|  466|Caenorhabditis elegans Hypothetical
           protein F43G9.10 protein.
          Length = 466

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 236 RVRGSTGPRVRRRHQRHLSGGRXARCQGKQIHG 138
           R R S+    RRRH+RH   GR  + +  ++ G
Sbjct: 81  RRRESSDEEDRRRHRRHEDYGRRRQVEKPEVLG 113


>Z69661-2|CAA93494.1|  925|Caenorhabditis elegans Hypothetical
           protein F48F7.4 protein.
          Length = 925

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 240 WKSSWLDRTACPAP 199
           ++++WLD T+CP P
Sbjct: 763 FQNTWLDATSCPLP 776


>U14524-1|AAA50785.1|  461|Caenorhabditis elegans
           avermectin-sensitive glutamate-gated chloride channel
           GluCl alpha protein.
          Length = 461

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 240 WKSSWLDRTACPA 202
           W S W DRTA PA
Sbjct: 293 WVSFWFDRTAIPA 305


>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
           protein F35A5.1 protein.
          Length = 1274

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 11/33 (33%), Positives = 13/33 (39%)
 Frame = -1

Query: 240 WKSSWLDRTACPAPTSTPSVRRPAXTLSGKTDT 142
           WK  W D  A   P S P   +    L+ K  T
Sbjct: 673 WKPPWEDDDAPAKPVSLPEPEKKTPVLAKKAPT 705


>AF016427-1|AAB65351.1|  594|Caenorhabditis elegans Hypothetical
           protein F32D1.1 protein.
          Length = 594

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 244 DLEEFVARPDRVSGADINAICQEAGXHAVRE 152
           +LE      D  SGAD+  +C EA    +R+
Sbjct: 507 NLERIRELTDGYSGADMRQLCTEAAMGPIRD 537


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,149,124
Number of Sequences: 27780
Number of extensions: 51529
Number of successful extensions: 216
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 12,740,198
effective HSP length: 65
effective length of database: 10,934,498
effective search space used: 229624458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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