Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0122
(261 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 70 3e-13
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 50 3e-07
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 36 0.003
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 36 0.003
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 33 0.021
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 33 0.028
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 33 0.037
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 33 0.037
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 33 0.037
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 30 0.26
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 29 0.45
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 29 0.45
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 29 0.45
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 28 0.79
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 28 1.1
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 28 1.1
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 26 3.2
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 26 3.2
Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical p... 26 4.2
Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical pr... 26 4.2
AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical ... 26 4.2
AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A ... 26 4.2
AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B ... 26 4.2
Z81104-7|CAB70253.2| 647|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z82093-7|CAB05021.1| 226|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical pr... 25 7.4
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 25 7.4
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 25 9.8
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 25 9.8
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 69.7 bits (163), Expect = 3e-13
Identities = 31/44 (70%), Positives = 38/44 (86%)
Frame = -3
Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKD 125
S +VDLE++VARPD++SGADIN+ICQEAG AVRENRY+ KD
Sbjct: 351 SDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKD 394
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 49.6 bits (113), Expect = 3e-07
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = -3
Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKDF 122
EV+LEEF+ D +SGADI A+C EAG A+RE R +DF
Sbjct: 380 EVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDF 422
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 36.3 bits (80), Expect = 0.003
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -3
Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKDF 122
E+D E V D S AD+ +C EAG A+R R +DF
Sbjct: 334 EIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDF 376
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 36.3 bits (80), Expect = 0.003
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -3
Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKDF 122
E+D E V D S AD+ +C EAG A+R R +DF
Sbjct: 342 EIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDF 384
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 33.5 bits (73), Expect = 0.021
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 247 VDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKDF 122
V E + + +SGA+I A+C EAG A+R R DF
Sbjct: 376 VTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTDDF 417
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 33.1 bits (72), Expect = 0.028
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -3
Query: 256 SIEVDLE-EFVARP-DRVSGADINAICQEAGXHAVRENRYMXRPKDF 122
S+E D+ + +AR +GA+I ++C EAG A+R R + KDF
Sbjct: 365 SVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDF 411
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 32.7 bits (71), Expect = 0.037
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 208 SGADINAICQEAGXHAVRENRYMXRPKDF 122
SGA++ ++C EAG A+RE R +DF
Sbjct: 365 SGAEVKSVCTEAGMFALRERRIHVTQEDF 393
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 32.7 bits (71), Expect = 0.037
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 208 SGADINAICQEAGXHAVRENRYMXRPKDF 122
SGA++ ++C EAG A+RE R +DF
Sbjct: 360 SGAEVKSVCTEAGMFALRERRIHVTQEDF 388
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 32.7 bits (71), Expect = 0.037
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 208 SGADINAICQEAGXHAVRENRYMXRPKDF 122
SGA++ ++C EAG A+RE R +DF
Sbjct: 381 SGAEVKSVCTEAGMFALRERRIHVTQEDF 409
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 29.9 bits (64), Expect = 0.26
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRENRYMXRPKDF 122
+V+ EE D +GA A+C EAG A+R + +DF
Sbjct: 369 DVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDF 411
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 29.1 bits (62), Expect = 0.45
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = -3
Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVR 155
S E++ ++ AR + SGAD+ ++C+ A + +R
Sbjct: 381 SDEINYDDLAARTEGFSGADVVSLCRTAAINVLR 414
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 29.1 bits (62), Expect = 0.45
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = -3
Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVR 155
S E++ ++ AR + SGAD+ ++C+ A + +R
Sbjct: 381 SDEINYDDLAARTEGFSGADVVSLCRTAAINVLR 414
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 29.1 bits (62), Expect = 0.45
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = -3
Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVR 155
S E++ ++ AR + SGAD+ ++C+ A + +R
Sbjct: 381 SDEINYDDLAARTEGFSGADVVSLCRTAAINVLR 414
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 28.3 bits (60), Expect = 0.79
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRE 152
+VDLE+ GAD+ ++C EA +RE
Sbjct: 399 DVDLEQIANECHGFVGADLASLCSEAALQQIRE 431
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVREN 149
S ++DL SGAD+ ICQ A A+RE+
Sbjct: 674 SKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRES 709
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRE 152
+VDLE+ GAD+ ++C EA +RE
Sbjct: 398 DVDLEQVANECHGFVGADLASLCSEAAIQQIRE 430
Score = 27.9 bits (59), Expect = 1.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVREN 149
S ++DL SGAD+ ICQ A A+RE+
Sbjct: 672 SADLDLNFLAKNTVGFSGADLTEICQRACKLAIRES 707
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 250 EVDLEEFVARPDRVSGADINAICQEAGXHAVRE 152
+VDLE+ GAD+ ++C EA +RE
Sbjct: 398 DVDLEQVANECHGFVGADLASLCSEAAIQQIRE 430
Score = 27.9 bits (59), Expect = 1.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 256 SIEVDLEEFVARPDRVSGADINAICQEAGXHAVREN 149
S ++DL SGAD+ ICQ A A+RE+
Sbjct: 672 SADLDLNFLAKNTVGFSGADLTEICQRACKLAIRES 707
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -3
Query: 241 LEEFVARPDRVSGADINAICQEAGXHAVREN 149
+++ V + SGA++ A+C+ A A+RE+
Sbjct: 653 IDKLVEKTSGYSGAELVAVCRTAAMFAMRES 683
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 208 SGADINAICQEAGXHAVRENRYMXRPKDF 122
SGADI+ +C EA A R+ + K F
Sbjct: 502 SGADISNVCNEAALIAARDANHEISNKHF 530
>Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 240 WKSSWLDRTACPA 202
W S W+DRTA PA
Sbjct: 485 WVSFWIDRTAVPA 497
>Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical
protein R11G10.1b protein.
Length = 478
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 240 WKSSWLDRTACPA 202
W S W+DRTA PA
Sbjct: 306 WVSFWIDRTAVPA 318
>Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 240 WKSSWLDRTACPA 202
W S W+DRTA PA
Sbjct: 485 WVSFWIDRTAVPA 497
>AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical
protein Y6B3B.9 protein.
Length = 485
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -1
Query: 252 LKWIWKSSWLD--RTACPAPTSTPSVRRP 172
L W+WK+ WL R A + +T S + P
Sbjct: 153 LDWLWKNFWLSDARVAMNSAAATNSSKNP 181
>AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A
protein protein.
Length = 657
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 240 WKSSWLDRTACPA 202
W S W+DRTA PA
Sbjct: 485 WVSFWIDRTAVPA 497
>AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B
protein protein.
Length = 478
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 240 WKSSWLDRTACPA 202
W S W+DRTA PA
Sbjct: 306 WVSFWIDRTAVPA 318
>Z81104-7|CAB70253.2| 647|Caenorhabditis elegans Hypothetical
protein M199.3 protein.
Length = 647
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 243 IWKSSWLDRTACPAPTSTPSVRRP 172
IWK ++ + ACP TS V+RP
Sbjct: 115 IWKFTFTLKYACPITTSYVFVQRP 138
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 240 WKSSWLDRTACPA 202
W S W DRTA PA
Sbjct: 293 WVSFWFDRTAIPA 305
>Z82093-7|CAB05021.1| 226|Caenorhabditis elegans Hypothetical
protein ZK39.8 protein.
Length = 226
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -1
Query: 249 KWIWKSSWLDRTACPAPTSTPSVRRPAXTLSGK 151
KW W+++ LD C P + R GK
Sbjct: 190 KWTWQANRLDDVQCQVPAGSNVARTVRGYACGK 222
>Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical
protein F43G9.10 protein.
Length = 466
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 236 RVRGSTGPRVRRRHQRHLSGGRXARCQGKQIHG 138
R R S+ RRRH+RH GR + + ++ G
Sbjct: 81 RRRESSDEEDRRRHRRHEDYGRRRQVEKPEVLG 113
>Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical
protein F48F7.4 protein.
Length = 925
Score = 25.0 bits (52), Expect = 7.4
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -1
Query: 240 WKSSWLDRTACPAP 199
++++WLD T+CP P
Sbjct: 763 FQNTWLDATSCPLP 776
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 240 WKSSWLDRTACPA 202
W S W DRTA PA
Sbjct: 293 WVSFWFDRTAIPA 305
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = -1
Query: 240 WKSSWLDRTACPAPTSTPSVRRPAXTLSGKTDT 142
WK W D A P S P + L+ K T
Sbjct: 673 WKPPWEDDDAPAKPVSLPEPEKKTPVLAKKAPT 705
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 244 DLEEFVARPDRVSGADINAICQEAGXHAVRE 152
+LE D SGAD+ +C EA +R+
Sbjct: 507 NLERIRELTDGYSGADMRQLCTEAAMGPIRD 537
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,149,124
Number of Sequences: 27780
Number of extensions: 51529
Number of successful extensions: 216
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 12,740,198
effective HSP length: 65
effective length of database: 10,934,498
effective search space used: 229624458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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