Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0120
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    28   0.057
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.9  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   4.9  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   4.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   6.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.5  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 28.3 bits (60), Expect = 0.057
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 238  EVFP*SESRRAPSAGPMLPVAAVTRRTSRTV 330
            E  P + S  APS  PM+P   VT  TSR +
Sbjct: 2283 ECHPDASSTMAPSTTPMVPDKPVTTTTSRPI 2313


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = -3

Query: 282 SSGWRSPALASRKHFLFICVEPGSTPRCPSGTPSMSPQ 169
           + G+R    +S K    +   P S     S TPS  PQ
Sbjct: 197 AKGFRENGKSSAKRKQLVSEHPDSPNSKKSATPSPPPQ 234


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 210 TPRCPSGTPSMSPQKGSPDTSA 145
           TP+      SMSPQ  S + SA
Sbjct: 150 TPKTSPNEASMSPQSTSSNNSA 171


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 210 TPRCPSGTPSMSPQKGSPDTSA 145
           TP+      SMSPQ  S + SA
Sbjct: 170 TPKTSPNEASMSPQSTSSNNSA 191


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 68  CCACK*FQFFHRLNNFSFVLLTLF 139
           CC+ K F+    + N   VLL LF
Sbjct: 107 CCSKKSFRMNFAIFNLYMVLLLLF 130


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/37 (21%), Positives = 18/37 (48%)
 Frame = +1

Query: 514 HQCGAVPIX*LEPLSKTKATRLSCVCVEIRSGQFCPV 624
           ++C + P   L+ + + K    +C C    +G+ C +
Sbjct: 418 NECDSNPCKHLDAICQDKLGDYACYCPPKHTGKNCEI 454


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -2

Query: 298 LPAAWVQRMALSCSRFTETLPVYLC*AWQYSALSKRNS 185
           L  A  ++  L+C R    L   LC   + + LS RN+
Sbjct: 55  LDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNT 92


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -2

Query: 400 ELLAVLNSSGA 368
           ELLA+L SSGA
Sbjct: 105 ELLAILGSSGA 115


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -2

Query: 400 ELLAVLNSSGA 368
           ELLA+L SSGA
Sbjct: 105 ELLAILGSSGA 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,813
Number of Sequences: 336
Number of extensions: 2836
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)