Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0120
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    25   0.81 
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    25   0.81 
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           25   0.81 
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   3.3  

>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 2   ADSVEPLQCKLLTFNSVYNDSFCCA 76
           AD    + C LL+F    NDS C A
Sbjct: 38  ADRHRRVTCDLLSFKGQVNDSACAA 62


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 2   ADSVEPLQCKLLTFNSVYNDSFCCA 76
           AD    + C LL+F    NDS C A
Sbjct: 38  ADRHRRVTCDLLSFKGQVNDSACAA 62


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 2  ADSVEPLQCKLLTFNSVYNDSFCCA 76
          AD    + C LL+F    NDS C A
Sbjct: 13 ADRHRRVTCDLLSFKGQVNDSACAA 37


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -1

Query: 281 PADGALLLSLHGNTSCLFVLSLAVLRAVQAELH 183
           P DGAL+L  + +   L  + + +++ V  +LH
Sbjct: 126 PEDGALILHYYSDRPGLEHIVIGIVKTVAKKLH 158


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -1

Query: 281 PADGALLLSLHGNTSCLFVLSLAVLRAVQAELH 183
           P DGAL+L  + +   L  + + +++ V  +LH
Sbjct: 126 PEDGALILHYYSDRPGLEHIVIGIVKTVAKKLH 158


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 330 NSARGASSHRRYRQHGSSGW 271
           N++RG S       HGS  W
Sbjct: 392 NNSRGHSGQSSSHHHGSKSW 411


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,503
Number of Sequences: 438
Number of extensions: 3103
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)