BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0118
(741 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF513636-1|AAM53608.1| 222|Anopheles gambiae glutathione S-tran... 25 2.5
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 24 5.7
CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein ... 23 9.9
>AF513636-1|AAM53608.1| 222|Anopheles gambiae glutathione
S-transferase D6 protein.
Length = 222
Score = 25.0 bits (52), Expect = 2.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 588 HITVADSSVAITYAISYGL 532
HITVAD ++A+T A GL
Sbjct: 157 HITVADFAIAVTVAALDGL 175
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 23.8 bits (49), Expect = 5.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -1
Query: 150 LLNPMIHVNLILVWKKKKSCKITFSLILYIINIISKSTH*LLTVSTKTPT 1
LL P I VN + ++ ++ + + + I + T +L STK PT
Sbjct: 731 LLIPGIDVNAVKAAAEEAVASVSHWMAQHHLQIAPEKTECVLISSTKNPT 780
>CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein
protein.
Length = 196
Score = 23.0 bits (47), Expect = 9.9
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 166 LILIFPT*SHDTCQPNSCLEEK 101
+I I P H C PN C + K
Sbjct: 116 IIYIEPKGKHPECVPNQCADGK 137
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 777,671
Number of Sequences: 2352
Number of extensions: 16977
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -