Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0118
         (741 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g08090.1 68418.m00943 hypothetical protein                          28   7.5  
At4g10010.1 68417.m01638 protein kinase family protein contains ...    28   7.5  

>At5g08090.1 68418.m00943 hypothetical protein 
          Length = 322

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 586 MHNAI*NVHMYLMWPLYMGYKY 651
           MH  I  V MYL WPLY  + +
Sbjct: 32  MHWLIVGVEMYLFWPLYPNFPH 53


>At4g10010.1 68417.m01638 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 469

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 156 FSLLNPMIHVNLILVWKKKKSCK 88
           FS  N MIH ++   W K +SC+
Sbjct: 356 FSHTNSMIHPSITATWSKNESCR 378


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,843,782
Number of Sequences: 28952
Number of extensions: 319477
Number of successful extensions: 464
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)