Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0117
         (807 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q30IA4 Cluster: Cytochrome oxidase subunit II; n=1; Dic...    34   4.8  
UniRef50_Q5A7B0 Cluster: Putative uncharacterized protein; n=1; ...    34   4.8  
UniRef50_A5L2V1 Cluster: Putative uncharacterized protein; n=1; ...    33   8.5  

>UniRef50_Q30IA4 Cluster: Cytochrome oxidase subunit II; n=1;
           Dichroplus maculipennis|Rep: Cytochrome oxidase subunit
           II - Dichroplus maculipennis
          Length = 123

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -1

Query: 615 WKHSLLF*CGPLCWMPQHFLYMFSVQDQQMCKHC 514
           WK  +L    P CW P HF Y FS  +   C  C
Sbjct: 60  WKWWIL---APXCWQPNHFTYKFSSSNFNKCIRC 90


>UniRef50_Q5A7B0 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 756

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 24/78 (30%), Positives = 35/78 (44%)
 Frame = -2

Query: 764 HSSHNPFINHGWIL*KSHXSYTTNPPRAKVRINIQSIET*TLNLVISPSVGSTLSFFDAA 585
           HS+HN   NHG +  KS  S T N   +   I  +       +++I+   G  L      
Sbjct: 81  HSTHNTTSNHGSVTPKSRRSVTPNSRMSLTPIRSRRNSRRRSSIIIT-KTGEKLY---EP 136

Query: 584 HFAGCRNISYICFLCKTS 531
           ++ G   I Y+ F CKTS
Sbjct: 137 NYQGPITIDYLKFFCKTS 154


>UniRef50_A5L2V1 Cluster: Putative uncharacterized protein; n=1;
           Vibrionales bacterium SWAT-3|Rep: Putative
           uncharacterized protein - Vibrionales bacterium SWAT-3
          Length = 343

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 20/46 (43%), Positives = 27/46 (58%)
 Frame = +2

Query: 353 LTLV*FIYNKTLFSNLRLKTFILHSYRKVPVYLFRDINETSERWLK 490
           +TLV  IYN +   +  LK++I HS   V +   +DI  TSER LK
Sbjct: 199 ITLVFLIYNFSTERDFSLKSYISHSKAHVNLEEKKDIPVTSERELK 244


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 825,374,445
Number of Sequences: 1657284
Number of extensions: 16854241
Number of successful extensions: 38237
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 36810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38214
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)