Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0115
         (769 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28993-1|AAK31494.2|  242|Caenorhabditis elegans Hypothetical pr...    31   0.68 
U28943-8|AAK68293.1|  325|Caenorhabditis elegans Serpentine rece...    31   0.68 
Z68320-2|CAA92706.1|  502|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z81513-6|CAB04176.1|  341|Caenorhabditis elegans Hypothetical pr...    29   4.8  
U28943-9|AAA68361.2|  325|Caenorhabditis elegans Serpentine rece...    28   6.4  
Z46267-5|CAA86423.1|  216|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>U28993-1|AAK31494.2|  242|Caenorhabditis elegans Hypothetical
           protein F22D3.4 protein.
          Length = 242

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = -3

Query: 518 FFYERI*LLLVFQINKKNNAKIIFFMHIVT*ISQKWNGRYFIKCTKKI 375
           FFY  I +L VF I+ KNN+KI+   +  +   +K+   Y++   +K+
Sbjct: 191 FFYILIPILPVFHIDSKNNSKIMELTNNCSDSVRKFPNHYWMNSNEKV 238


>U28943-8|AAK68293.1|  325|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 58 protein.
          Length = 325

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -1

Query: 514 FMSVFNYYWYFK*IKKIMLK*YFLCILLHKYPKNGMADILSSVQKKLCFIVSLITF 347
           ++S FN+YW F  +  I+ +   L ++ HK P   +  +   +    C  ++LITF
Sbjct: 8   YVSFFNWYWPFCGVSAIIFQIILLYLISHKSPAT-LDGLKIFLYNTSCVQIALITF 62


>Z68320-2|CAA92706.1|  502|Caenorhabditis elegans Hypothetical
           protein W07A12.7 protein.
          Length = 502

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = -1

Query: 496 YYWYFK*IKKIMLK*YFLCILLHKYPKNGMADILSSVQKKLCFIVSLITFLSSC 335
           Y WY     ++ +       LLHK+PK GMA  ++++   +       T   +C
Sbjct: 243 YLWYLGLDMQLYMVAPIFLNLLHKFPKRGMALTITTIIASMVIRAGYCTAYGTC 296


>Z81513-6|CAB04176.1|  341|Caenorhabditis elegans Hypothetical
           protein F26D2.7 protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
 Frame = -3

Query: 329 LNWMRFNKLIRKT*FIHFQYLGSKFFIKKIHWNMFHAFFKNLKTKISQFESEQNVFESGY 150
           + W   + LI     I FQY    FF  KI++NM        K ++  F + Q  F+S  
Sbjct: 191 IQWKALSLLISAGILICFQYFIFVFFGLKIYFNM--------KLRLKSFSACQEKFQSQL 242

Query: 149 LQFLMRFSSKP-CFLSSCTRPHLVNVLASEPT 57
            + L+  +  P  FL   + P  V  L S  T
Sbjct: 243 FKALVAQTIGPTIFLILPSAPFFVTTLLSPYT 274


>U28943-9|AAA68361.2|  325|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 59 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -1

Query: 514 FMSVFNYYWYFK*IKKIMLK*YFLCILLHKYPKNGMADILSSVQKKLCFIVSLITF 347
           ++  FN+YW F  +  I+ +   L ++ HK P   +  +   +    C  ++LITF
Sbjct: 8   YVPFFNWYWPFCGVLAIIFQTILLHLISHKSPAT-LDGLKIFLYNTSCVQIALITF 62


>Z46267-5|CAA86423.1|  216|Caenorhabditis elegans Hypothetical
           protein F49E2.4 protein.
          Length = 216

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 94  LVHELRKHGFEENLMRNCK*PDSNTFCS 177
           +V E+ K GF E  MRNCK  D+N   S
Sbjct: 189 IVREM-KRGFLEEAMRNCKEEDNNGLLS 215


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,310,820
Number of Sequences: 27780
Number of extensions: 338623
Number of successful extensions: 788
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)