Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0115
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   2.4  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   4.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   9.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.5  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -1

Query: 292 LNSYISNT*VRNFSLKKYIGIC 227
           ++SY+S   +  FS+++Y+ IC
Sbjct: 123 MSSYVSVLTIVAFSMERYLAIC 144


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 242 IHWNMFHAFFKNLKTKI 192
           ++W   HA  K LKT I
Sbjct: 265 MYWGQGHAILKGLKTSI 281


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 420 GYLCNNMHKKYYF 458
           G+LC    K+Y+F
Sbjct: 294 GFLCERHQKRYFF 306


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 210  FKEGMKHIPMYFFN 251
            F EGM H+P   FN
Sbjct: 1149 FMEGMPHLPFTPFN 1162


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,942
Number of Sequences: 438
Number of extensions: 4244
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)