Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0114
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    24   1.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    24   1.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.0  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 557 NHFCIKKDVWCRGTPD 604
           N  CI K+++C G PD
Sbjct: 118 NGECIDKELFCNGKPD 133


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 557 NHFCIKKDVWCRGTPD 604
           N  CI K+++C G PD
Sbjct: 125 NGECIDKELFCNGKPD 140


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +3

Query: 204 HSPIKAGSRPAERWDGCMCSASTLSRRLNSPDWAPARSK 320
           H   K   R  +RW  CM     L  RL + D   A SK
Sbjct: 657 HLKDKKKIRAKKRWSQCMYMYFLLGFRLQANDELSAHSK 695


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +3

Query: 204 HSPIKAGSRPAERWDGCMCSASTLSRRLNSPDWAPARSK 320
           H   K   R  +RW  CM     L  RL + D   A SK
Sbjct: 657 HLKDKKKIRAKKRWSQCMYMYFLLGFRLQANDELSAHSK 695


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 493 LATKPCKSKFIPHYLRTNY 437
           +A K CK  F+PH L   Y
Sbjct: 473 VAPKECKQDFMPHELCDKY 491


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -2

Query: 361 TSLKTPAAHNRRPTLDRAGAQSGLLRRRDRVDAEHIHPSHRS 236
           T   TP    + PT D+A    G +  +  VD E    +H S
Sbjct: 840 TPRSTPDKREKSPTSDKAQEADGEVVVKKEVDEEERLENHTS 881


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 271 PCPAVSIAPTGLRPGPR 321
           PCP + I   G R GP+
Sbjct: 323 PCPDIIIDVHGTRRGPK 339


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,213
Number of Sequences: 336
Number of extensions: 4142
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)