Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0111
         (766 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0107 - 843820-846335,846400-846511                               30   1.8  
11_01_0107 - 801148-803633,803727-803860,803990-804006,804321-80...    30   1.8  
01_03_0302 + 14790674-14791354                                         29   4.1  
08_01_1000 + 10154024-10154147,10155500-10155761,10155839-101558...    28   9.4  

>12_01_0107 - 843820-846335,846400-846511
          Length = 875

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 763 PNNPPPWLHFSHTH-HNHDGFVKSHVPYTTKSSQSPSXYKIS 641
           P  PPP   FS TH H H G  + H+PY   + +  S Y+ S
Sbjct: 635 PRYPPPD-PFSPTHSHYHCGHGQPHIPYNCSAWEFNSYYQSS 675


>11_01_0107 -
           801148-803633,803727-803860,803990-804006,804321-804504,
           804819-804883
          Length = 961

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 763 PNNPPPWLHFSHTH-HNHDGFVKSHVPYTTKSSQSPSXYKIS 641
           P  PPP   FS TH H H G  + H+PY   + +  S Y+ S
Sbjct: 721 PRYPPPD-PFSPTHSHYHCGHGQPHIPYNCSAWEFNSYYQSS 761


>01_03_0302 + 14790674-14791354
          Length = 226

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 698 LHKSIMVMMGVGEMEPWWW 754
           + + + V+ GVGE E WWW
Sbjct: 207 MERHLGVVAGVGEREGWWW 225


>08_01_1000 +
           10154024-10154147,10155500-10155761,10155839-10155885,
           10155967-10155998,10156079-10156146,10156214-10156605,
           10156811-10157009,10157494-10157636,10157722-10158366,
           10158493-10158551,10158725-10158823
          Length = 689

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 711 MDL*SPMFLIQPNPPRAQVRIKYQSIE 631
           MD+  P F I+P+PPR Q  +  Q ++
Sbjct: 306 MDIGMPDFRIEPSPPRVQDEMNAQPVQ 332


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,627,579
Number of Sequences: 37544
Number of extensions: 470125
Number of successful extensions: 1093
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)