Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0111
         (766 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69636-2|CAA93463.3|  247|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z81134-7|CAD56602.1|  879|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z81134-6|CAB03450.2|  795|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AL117202-32|CAD56611.1|  879|Caenorhabditis elegans Hypothetical...    28   6.3  
AL117202-31|CAD56610.1|  795|Caenorhabditis elegans Hypothetical...    28   6.3  

>Z69636-2|CAA93463.3|  247|Caenorhabditis elegans Hypothetical
           protein F20B10.3 protein.
          Length = 247

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +1

Query: 184 SLSN*YPAPNLEVVASNHCPSRIPISLSSAXTDACG 291
           S  N  P P L   AS +C S  P+  S   T  CG
Sbjct: 55  STGNCQPTPTLSPCASGNCGSVQPVQASPCSTGNCG 90


>Z81134-7|CAD56602.1|  879|Caenorhabditis elegans Hypothetical
           protein T28D6.5b protein.
          Length = 879

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 227 HQTIALHEYRSPSLRLXPTPVGQNISVFIK 316
           ++ + +  Y SP   + PTP   + SVFIK
Sbjct: 90  YECVCMRPYSSPHSPVRPTPAAPDCSVFIK 119


>Z81134-6|CAB03450.2|  795|Caenorhabditis elegans Hypothetical
           protein T28D6.5a protein.
          Length = 795

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 227 HQTIALHEYRSPSLRLXPTPVGQNISVFIK 316
           ++ + +  Y SP   + PTP   + SVFIK
Sbjct: 90  YECVCMRPYSSPHSPVRPTPAAPDCSVFIK 119


>AL117202-32|CAD56611.1|  879|Caenorhabditis elegans Hypothetical
           protein T28D6.5b protein.
          Length = 879

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 227 HQTIALHEYRSPSLRLXPTPVGQNISVFIK 316
           ++ + +  Y SP   + PTP   + SVFIK
Sbjct: 90  YECVCMRPYSSPHSPVRPTPAAPDCSVFIK 119


>AL117202-31|CAD56610.1|  795|Caenorhabditis elegans Hypothetical
           protein T28D6.5a protein.
          Length = 795

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 227 HQTIALHEYRSPSLRLXPTPVGQNISVFIK 316
           ++ + +  Y SP   + PTP   + SVFIK
Sbjct: 90  YECVCMRPYSSPHSPVRPTPAAPDCSVFIK 119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,231,275
Number of Sequences: 27780
Number of extensions: 391489
Number of successful extensions: 891
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)