Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0111
         (766 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    30   0.021
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    30   0.021
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.77 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    24   1.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   3.1  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   7.2  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   9.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   9.5  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 30.3 bits (65), Expect = 0.021
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 555 PAKWPHQKRRECFQL 599
           P KWPH+ +R C+QL
Sbjct: 490 PGKWPHEDKRGCYQL 504


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 30.3 bits (65), Expect = 0.021
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 555 PAKWPHQKRRECFQL 599
           P KWPH+ +R C+QL
Sbjct: 580 PGKWPHEDKRGCYQL 594


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -1

Query: 754  PPPWLHFSHTHHNHDGFVKSHVPYTT 677
            P  W H   T HN+ GF  +   + T
Sbjct: 1526 PATWYHLRVTAHNNAGFAVAEYEFAT 1551


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = -2

Query: 738 ISPTPIITMMDL*SPMFLIQPNPPRAQVRIKYQSIETMNTDLVISPSVGSTL 583
           +SP P    +DL  P+      PPR + ++  +S+E     L+ S    S +
Sbjct: 443 VSPVPSPDPLDLAIPVRETLILPPRKRCKMILESMEIERNGLIASQRQNSVI 494


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +1

Query: 604 GDHQVSVHGLN-RLIFYTXLGSGRIWLYKEHGTSQIHHGYD 723
           GD    ++G+  R+     +G+  +WL   + + Q+  GYD
Sbjct: 45  GDGIGDLNGITARMDHIADIGADALWLSPIYKSPQVDFGYD 85


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -2

Query: 696 PMFLIQPNPPRAQVRIKYQS 637
           P+++ QP PP  ++R + +S
Sbjct: 75  PIYIPQPRPPHPRLRREAES 94


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 696 PMFLIQPNPPRAQVR 652
           P+++ QP PP  ++R
Sbjct: 102 PVYISQPRPPHPRLR 116



 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 696 PMFLIQPNPPRAQVR 652
           P+++ QP PP  ++R
Sbjct: 158 PVYISQPRPPHPRLR 172


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 734 LPHPS*P*WICEVPCSL 684
           L HP  P  +C +PC +
Sbjct: 577 LGHPEPPESVCSLPCEV 593


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,734
Number of Sequences: 438
Number of extensions: 4856
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)