Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0104
         (740 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   162   1e-41
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         27   0.61 
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   3.2  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   3.2  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    23   7.5  
CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    23   9.9  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   9.9  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   9.9  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  162 bits (393), Expect = 1e-41
 Identities = 80/136 (58%), Positives = 95/136 (69%)
 Frame = +2

Query: 266 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 445
           +YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK  DRG+LAR SGN+A+VI HNP
Sbjct: 82  MYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNP 141

Query: 446 DAKRTRVKLPSGAKKVLPSSNEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 625
           D KRTRVKLPSGAKKVLPS+N A   ++     +     K        +      P VRG
Sbjct: 142 DTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRG 201

Query: 626 XAMNPVEASSTGGGNH 673
            AMNPVE    GGGNH
Sbjct: 202 VAMNPVE-HPHGGGNH 216



 Score =  127 bits (306), Expect = 4e-31
 Identities = 57/77 (74%), Positives = 66/77 (85%)
 Frame = +1

Query: 43  AQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 222
           AQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAVV+FRDP
Sbjct: 7   AQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAVVNFRDP 66

Query: 223 YKFXTRKELFMLPKALH 273
           Y+F   K+LF+  + ++
Sbjct: 67  YRFRLSKQLFIAAEGMY 83


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 517 VGIVAGGGRIDKPILKAGRAYHK 585
           +G V GG   D  IL  GRAYH+
Sbjct: 87  LGAVVGGHTSDGEILYVGRAYHE 109


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 133 RHGYIKGVVKDIIHDP 180
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 133 RHGYIKGVVKDIIHDP 180
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -3

Query: 594 DLVLVVCPSSFQNRFVN-TSTSSNNTDHASLLDGRTFLAPDGS 469
           D V+ +  + ++N F    S + +  DH   L  R F  PDGS
Sbjct: 243 DQVVQLRDNLYKNSFATLVSIARHFPDHFDTLRQRLFKLPDGS 285


>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +3

Query: 198 GCCTLPRSIQVQXKEGALHAPEGSTQANLFIVER 299
           GCC LP +   Q K+ + +    +T+   +  E+
Sbjct: 16  GCCALPANTNAQTKQDSSNNNNRTTELFAYPAEQ 49


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 551 LSIRPPPATIPTM 513
           + +RPPP  +PTM
Sbjct: 114 MGMRPPPMMVPTM 126


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = +3

Query: 489 RFCHQATRHGRYCCWRWTY 545
           +FC   T    Y  W W Y
Sbjct: 513 QFCKDTTPECNYTFWEWLY 531


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 849,572
Number of Sequences: 2352
Number of extensions: 18711
Number of successful extensions: 37
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)