BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0104
(740 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 154 3e-37
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 154 3e-37
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 154 3e-37
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 154 4e-37
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 154 4e-37
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 154 4e-37
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 154 4e-37
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 154 4e-37
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 154 4e-37
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 122 1e-27
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 31 3.3
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 30 7.6
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 30 7.6
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 30 7.6
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 30 7.6
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 154 bits (374), Expect = 3e-37
Identities = 79/136 (58%), Positives = 94/136 (69%)
Frame = +2
Query: 266 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 445
++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 446 DAKRTRVKLPSGAKKVLPSSNEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 625
+ K+TRVKLPSG+KKV+ S+N A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 626 XAMNPVEASSTGGGNH 673
AMNPVE GGGNH
Sbjct: 202 VAMNPVE-HPFGGGNH 216
Score = 122 bits (294), Expect = 1e-27
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +1
Query: 46 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 225
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 226 KFXTRKELFMLPKALH 273
+F R ELF+ + +H
Sbjct: 68 RFKKRTELFIAAEGIH 83
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 154 bits (374), Expect = 3e-37
Identities = 79/136 (58%), Positives = 94/136 (69%)
Frame = +2
Query: 266 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 445
++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 446 DAKRTRVKLPSGAKKVLPSSNEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 625
+ K+TRVKLPSG+KKV+ S+N A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 626 XAMNPVEASSTGGGNH 673
AMNPVE GGGNH
Sbjct: 202 VAMNPVE-HPFGGGNH 216
Score = 122 bits (294), Expect = 1e-27
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +1
Query: 46 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 225
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 226 KFXTRKELFMLPKALH 273
+F R ELF+ + +H
Sbjct: 68 RFKKRTELFIAAEGIH 83
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 154 bits (374), Expect = 3e-37
Identities = 79/136 (58%), Positives = 94/136 (69%)
Frame = +2
Query: 266 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 445
++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 446 DAKRTRVKLPSGAKKVLPSSNEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 625
+ K+TRVKLPSG+KKV+ S+N A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 626 XAMNPVEASSTGGGNH 673
AMNPVE GGGNH
Sbjct: 202 VAMNPVE-HPFGGGNH 216
Score = 122 bits (294), Expect = 1e-27
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +1
Query: 46 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 225
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 226 KFXTRKELFMLPKALH 273
+F R ELF+ + +H
Sbjct: 68 RFKKRTELFIAAEGIH 83
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 154 bits (373), Expect = 4e-37
Identities = 78/136 (57%), Positives = 94/136 (69%)
Frame = +2
Query: 266 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 445
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 446 DAKRTRVKLPSGAKKVLPSSNEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 625
+ K+TRVKLPSG+KKV+ S+N A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 626 XAMNPVEASSTGGGNH 673
AMNPVE GGGNH
Sbjct: 202 VAMNPVE-HPFGGGNH 216
Score = 122 bits (294), Expect = 1e-27
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +1
Query: 46 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 225
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 226 KFXTRKELFMLPKALH 273
+F R ELF+ + +H
Sbjct: 68 RFKKRTELFIAAEGIH 83
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 154 bits (373), Expect = 4e-37
Identities = 78/136 (57%), Positives = 94/136 (69%)
Frame = +2
Query: 266 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 445
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 446 DAKRTRVKLPSGAKKVLPSSNEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 625
+ K+TRVKLPSG+KKV+ S+N A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 626 XAMNPVEASSTGGGNH 673
AMNPVE GGGNH
Sbjct: 202 VAMNPVE-HPFGGGNH 216
Score = 122 bits (294), Expect = 1e-27
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +1
Query: 46 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 225
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 226 KFXTRKELFMLPKALH 273
+F R ELF+ + +H
Sbjct: 68 RFKKRTELFIAAEGIH 83
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 154 bits (373), Expect = 4e-37
Identities = 78/136 (57%), Positives = 94/136 (69%)
Frame = +2
Query: 266 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 445
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 446 DAKRTRVKLPSGAKKVLPSSNEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 625
+ K+TRVKLPSG+KKV+ S+N A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 626 XAMNPVEASSTGGGNH 673
AMNPVE GGGNH
Sbjct: 202 VAMNPVE-HPFGGGNH 216
Score = 122 bits (294), Expect = 1e-27
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +1
Query: 46 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 225
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 226 KFXTRKELFMLPKALH 273
+F R ELF+ + +H
Sbjct: 68 RFKKRTELFIAAEGIH 83
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 154 bits (373), Expect = 4e-37
Identities = 78/136 (57%), Positives = 94/136 (69%)
Frame = +2
Query: 266 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 445
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 446 DAKRTRVKLPSGAKKVLPSSNEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 625
+ K+TRVKLPSG+KKV+ S+N A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 626 XAMNPVEASSTGGGNH 673
AMNPVE GGGNH
Sbjct: 202 VAMNPVE-HPFGGGNH 216
Score = 122 bits (294), Expect = 1e-27
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +1
Query: 46 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 225
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 226 KFXTRKELFMLPKALH 273
+F R ELF+ + +H
Sbjct: 68 RFKKRTELFIAAEGIH 83
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 154 bits (373), Expect = 4e-37
Identities = 78/136 (57%), Positives = 94/136 (69%)
Frame = +2
Query: 266 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 445
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 36 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 95
Query: 446 DAKRTRVKLPSGAKKVLPSSNEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 625
+ K+TRVKLPSG+KKV+ S+N A ++ + K ++ P VRG
Sbjct: 96 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 155
Query: 626 XAMNPVEASSTGGGNH 673
AMNPVE GGGNH
Sbjct: 156 VAMNPVE-HPFGGGNH 170
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +1
Query: 163 DIIHDPGRGAPLAVVHFRDPYKFXTRKELFMLPKALH 273
DIIHDPGRGAPLA V FRDPY+F R ELF+ + +H
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIH 37
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 154 bits (373), Expect = 4e-37
Identities = 78/136 (57%), Positives = 94/136 (69%)
Frame = +2
Query: 266 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVIGHNP 445
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK DRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 446 DAKRTRVKLPSGAKKVLPSSNEAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGPYVRG 625
+ K+TRVKLPSG+KKV+ S+N A ++ + K ++ P VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 626 XAMNPVEASSTGGGNH 673
AMNPVE GGGNH
Sbjct: 202 VAMNPVE-HPFGGGNH 216
Score = 122 bits (294), Expect = 1e-27
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +1
Query: 46 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 225
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 226 KFXTRKELFMLPKALH 273
+F R ELF+ + +H
Sbjct: 68 RFKKRTELFIAAEGIH 83
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 122 bits (294), Expect = 1e-27
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +1
Query: 46 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 225
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 4 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 63
Query: 226 KFXTRKELFMLPKALH 273
+F R ELF+ + +H
Sbjct: 64 RFKKRTELFIAAEGIH 79
Score = 94.3 bits (224), Expect = 4e-19
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +2
Query: 266 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFA 424
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK DRG+LARASGN+A
Sbjct: 78 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 602 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPRCLMAEPSW 483
L LT +L+ A P F++ +S+ PPP ++P P + P W
Sbjct: 87 LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSP--ISVSPPW 125
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 317 GNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVI 433
G+ P+GA+P GT++ N+E + + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 317 GNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVI 433
G+ P+GA+P GT++ N+E + + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 317 GNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVI 433
G+ P+GA+P GT++ N+E + + RA+G ++
Sbjct: 176 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 214
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 317 GNVMPVGAMPEGTIVCNLEEKMXDRGRLARASGNFATVI 433
G+ P+GA+P GT++ N+E + + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,518,752
Number of Sequences: 237096
Number of extensions: 2880116
Number of successful extensions: 5245
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5227
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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