Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0103
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.7  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.7  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   6.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   6.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.1  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 99  LCDDIIYASESVADRRLSDA 40
           LC  IIYA  ++ D +L++A
Sbjct: 550 LCTHIIYAFATLKDHKLAEA 569


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 12  VIVSVQQRKVRRLNACPLPTRLHI*YHHTNTLNTYKEKC 128
           +I S++Q    R  A P  T   +   H+N + T +E C
Sbjct: 197 IIDSIRQNSQTRNQAVPTGTIKTLVQMHSNLVTTSEEVC 235


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 12  VIVSVQQRKVRRLNACPLPTRLHI*YHHTNTLNTYKEKC 128
           +I S++Q    R  A P  T   +   H+N + T +E C
Sbjct: 197 IIDSIRQNSQTRNQAVPTGTIKTLVQMHSNLVTTSEEVC 235


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 628 PXATQYICLCLSNRSTARCGCR 563
           P   QY  +C++  +  R GC+
Sbjct: 189 PDDCQYFYVCINGDTPRRSGCK 210


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -2

Query: 602 VSVKSIYGPLRLPVIL*RVM*FPVGRKLSTSFNFVKFH 489
           V ++  YG +++PV+   +   P     S   NF+  H
Sbjct: 250 VDIRDAYGNVKIPVLCKLIQSIPTHLLDSEKKNFIVDH 287


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 443 DDYQKFLDDLAKNKKSG 493
           D Y+KF +  +KN K G
Sbjct: 421 DGYKKFYEQFSKNIKLG 437


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,553
Number of Sequences: 336
Number of extensions: 3126
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)