Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0103
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88308-6|AAB42320.1| 180|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 30 1.6
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 30 1.6
Z46787-2|CAA86740.1| 262|Caenorhabditis elegans Hypothetical pr... 30 1.6
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 30 1.6
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 30 1.6
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 30 2.1
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 30 2.1
Z81558-5|CAB04542.2| 543|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81459-2|CAB03828.2| 543|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 29 4.8
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 28 6.3
AC024812-4|AAF59550.1| 197|Caenorhabditis elegans Hypothetical ... 28 6.3
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 8.3
>U88308-6|AAB42320.1| 180|Caenorhabditis elegans Hypothetical
protein C32E8.3 protein.
Length = 180
Score = 36.3 bits (80), Expect = 0.024
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Frame = +1
Query: 340 DKWMKQAKVIDGKKITTTDTAIXLQKTQIGKTR--HRRLPEVSR*SREEQKKWNLTKLK- 510
DKW+K A V+D K IT T T I K K + +V E++ + + ++
Sbjct: 38 DKWLKDAGVLDNKAITGTMTGIAFSKVTGPKKKATFDETKKVLAFVAEDRARQSKKPIQD 97
Query: 511 EVDNLRPTGNYITRYKITG----SRSGP*IDLTDTSKYTGSHXAALSMXTGKXEGDRRAG 678
E+D + + + G + +G LTD +KYTG+H GK +G ++G
Sbjct: 98 ELDAITEKLAKLEAPSVGGAAKANAAGVYSRLTDHTKYTGAHKERFD-AEGKGKG--KSG 154
Query: 679 XDFSSTGXGYV 711
++ GYV
Sbjct: 155 RADTTENTGYV 165
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 364 VIDGKKITTTDTAIXLQKTQIGKTRHRRLPEVS-R*SREEQKKWNLTKLKEVD 519
+IDGK T+ T I + + + + LP+V R ++E +K+N T K +D
Sbjct: 570 LIDGKAFTSRKTMIPVSENARNASSYNTLPDVKLRRAKEIAEKYNDTVTKMID 622
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 364 VIDGKKITTTDTAIXLQKTQIGKTRHRRLPEVS-R*SREEQKKWNLTKLKEVD 519
+IDGK T+ T I + + + + LP+V R ++E +K+N T K +D
Sbjct: 570 LIDGKAFTSRKTMIPVSENARNASSYNTLPDVKLRRAKEIAEKYNDTVTKMID 622
>Z46787-2|CAA86740.1| 262|Caenorhabditis elegans Hypothetical
protein C16C10.2 protein.
Length = 262
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/85 (31%), Positives = 37/85 (43%)
Frame = +2
Query: 413 KKLKSVKLGIDDYQKFLDDLAKNKKSGT*RN*KKLTTCGQPGITSHVTKSPAAAAGRRSI 592
+K K KL +DYQK D + K KKS +N Q H+ S A GR
Sbjct: 33 EKKKDYKLRAEDYQKKRDTIKKLKKSAMDKN--------QDEYHHHMVNSETWADGRHFD 84
Query: 593 *QTQANILGRTGQRFRXKLGKXKGI 667
+T+A T + + KLG K +
Sbjct: 85 KKTEAE---ETETQIQKKLGSLKDL 106
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 364 VIDGKKITTTDTAIXLQKTQIGKTRHRRLPEVS-R*SREEQKKWNLTKLKEVD 519
+IDGK T+ T I + + + + LP+V R ++E +K+N T K +D
Sbjct: 570 LIDGKAFTSRKTMIPVSENARNASSYNTLPDVKLRRAKEIAEKYNDTVTKMID 622
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 364 VIDGKKITTTDTAIXLQKTQIGKTRHRRLPEVS-R*SREEQKKWNLTKLKEVD 519
+IDGK T+ T I + + + + LP+V R ++E +K+N T K +D
Sbjct: 570 LIDGKAFTSRKTMIPVSENARNASSYNTLPDVKLRRAKEIAEKYNDTVTKMID 622
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform e protein.
Length = 2702
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 170 TQEVKDVKLENGNAPGASNGTSSKSEDS--AYLSRKPSRRFPNLEIPSPM 313
T+E+K++ G+A + + +S DS A+L+R+P P+PM
Sbjct: 2024 TEEIKNIARNGGSATFSCFASGDESPDSVSAFLTRQPQEETTEKLFPTPM 2073
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 170 TQEVKDVKLENGNAPGASNGTSSKSEDS--AYLSRKPSRRFPNLEIPSPM 313
T+E+K++ G+A + + +S DS A+L+R+P P+PM
Sbjct: 6870 TEEIKNIARNGGSATFSCFASGDESPDSVSAFLTRQPQEETTEKLFPTPM 6919
>Z81558-5|CAB04542.2| 543|Caenorhabditis elegans Hypothetical
protein F59D12.4 protein.
Length = 543
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 137 AQNTDAAVEQVTQEVKDVKLEN-GNAPGASNGTSSKSEDSAYLSRKPSRRFPNLEIPSPM 313
+ +A ++ ++ D + E+ GN PG+ + SSK E S Y RK + + P P+
Sbjct: 458 SHKAEARIQSDDEDYSDYEYESSGNFPGSGSYMSSKREYSPYF-RKHDDKIEIVIEPYPV 516
Query: 314 EKPSR 328
SR
Sbjct: 517 ISTSR 521
>Z81459-2|CAB03828.2| 543|Caenorhabditis elegans Hypothetical
protein F59D12.4 protein.
Length = 543
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 137 AQNTDAAVEQVTQEVKDVKLEN-GNAPGASNGTSSKSEDSAYLSRKPSRRFPNLEIPSPM 313
+ +A ++ ++ D + E+ GN PG+ + SSK E S Y RK + + P P+
Sbjct: 458 SHKAEARIQSDDEDYSDYEYESSGNFPGSGSYMSSKREYSPYF-RKHDDKIEIVIEPYPV 516
Query: 314 EKPSR 328
SR
Sbjct: 517 ISTSR 521
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +2
Query: 128 STEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSEDSAYLSRKPSRRFPNL---E 298
ST ++++ +A E ++ + ++ + S +SSK+ S + S K S +
Sbjct: 229 STSSESSSSASESESESKSESQVSSSKT-STSKASSSKAYGSDFESEKSSSSSASTISKV 287
Query: 299 IPSPMEKPSRSRKATNG*SKPKSLMXRK 382
P ++KP +++K +KP + K
Sbjct: 288 TPKKLDKPQKTKKPDKKRAKPDDIRQNK 315
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 233 SSKSEDSAYLSRKPSRRFPNLEIPSPMEKPS 325
S KSE S +++KPS P + P +KP+
Sbjct: 369 SQKSEASTKIAQKPSPTNPTVNFKQPSQKPA 399
>AC024812-4|AAF59550.1| 197|Caenorhabditis elegans Hypothetical
protein Y54E10BR.6 protein.
Length = 197
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 371 SMTLACFIHLSLCESVMAFPSDLGSPNLENALKASL 264
++TL F HLSL V P G PNL +K L
Sbjct: 19 ALTLRMFFHLSLDHEVCLHPKYFG-PNLNETIKMKL 53
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 8.3
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Frame = +2
Query: 353 SKPKSLMXRK*QQRTRPXFFKKLKSVKLGIDDYQKFLDDLAKNKKSGT*RN*KKLTTCGQ 532
S +++ R+ Q+R+ L +V+ + +QK D + K+ R KK + CG
Sbjct: 603 SSEETIETRRKQRRSCQQSDDCLNNVEYAV--FQKVYAD-KRTKREAVFRR-KKCSRCGV 658
Query: 533 PGITSHVTKSPAAAAGRRSI*QTQANILGRTGQRFRXK---LGKXKGIAGQEXTLVRRVR 703
G+T H K G+ +I ++ N + R R K LG+ I Q+ L RR R
Sbjct: 659 SGLTPHRVK---RNFGQPNINVSEQNCMAFPQCRHRVKRNFLGEDCNICTQDTGLKRRKR 715
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,068,077
Number of Sequences: 27780
Number of extensions: 300028
Number of successful extensions: 995
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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