Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0103
(762 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59460.1 68418.m07452 scarecrow-like transcription factor 11 ... 30 1.9
At3g10650.1 68416.m01281 expressed protein 29 2.6
At3g01513.1 68416.m00078 expressed protein ; expression supporte... 29 3.4
At2g39580.1 68415.m04855 expressed protein 29 3.4
At2g22795.1 68415.m02704 expressed protein 29 3.4
At2g21560.1 68415.m02566 expressed protein contains weak similar... 29 3.4
At1g77410.1 68414.m09015 beta-galactosidase, putative / lactase,... 29 3.4
At1g07540.1 68414.m00807 telomere-binding protein, putative simi... 29 3.4
At5g36230.1 68418.m04371 eIF4-gamma/eIF5/eIF2-epsilon domain-con... 29 4.5
At4g16280.2 68417.m02470 flowering time control protein / FCA ga... 29 4.5
At4g16280.1 68417.m02469 flowering time control protein / FCA ga... 29 4.5
At3g22160.1 68416.m02797 VQ motif-containing protein contains PF... 29 4.5
At3g11720.1 68416.m01437 expressed protein 29 4.5
At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containi... 28 5.9
At1g65220.1 68414.m07394 eIF4-gamma/eIF5/eIF2-epsilon domain-con... 28 5.9
At1g10760.1 68414.m01231 starch excess protein (SEX1) identical ... 28 5.9
At3g45780.1 68416.m04953 protein kinase / nonphototropic hypocot... 28 7.8
At3g27260.1 68416.m03407 DNA-binding bromodomain-containing prot... 28 7.8
At3g20490.1 68416.m02595 expressed protein 28 7.8
At2g22720.3 68415.m02692 expressed protein 28 7.8
At2g22720.2 68415.m02691 expressed protein 28 7.8
At2g22720.1 68415.m02693 expressed protein 28 7.8
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 28 7.8
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 28 7.8
>At5g59460.1 68418.m07452 scarecrow-like transcription factor 11
(SCL11) identical to cDNA scarecrow-like 11 (SCL11)
mRNA, partial cds gi:4580526
Length = 172
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 212 PGASNGTSSKSEDSAYLSRKPSRRFPNLEIPSPMEKPSRSRKATNG*SKPKS 367
P K + S +S + +R PN + P +KPS S K NG KPKS
Sbjct: 108 PSGETDGDLKRKQSEVVSEEQNR--PN-KSPRSFDKPSPSNKKGNGFKKPKS 156
>At3g10650.1 68416.m01281 expressed protein
Length = 1309
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 245 EDSAYLSRKP-SRRFPNLEIPSPMEKPSRSRKATNG*SKPKSLMXRK*QQRTRPXFFKKL 421
EDS +L+R P ++ P + + + KPS R NG P+S R + +
Sbjct: 259 EDSVFLNRTPFPQKSPTMSL---VTKPSGQRPLENGFVTPRSRGRSAVYSMARTPYSRPQ 315
Query: 422 KSVKLG 439
SVK+G
Sbjct: 316 SSVKIG 321
>At3g01513.1 68416.m00078 expressed protein ; expression supported
by MPSS
Length = 216
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 230 TSSKSEDSAYLSRKPSRRFPNLEIPSPMEKPSRSRKATNG*SKPKSLMXRK 382
T++K++ A + K S RFP + SP+ P+ S+ + + S PK +K
Sbjct: 81 TTNKTDKEA-AAEKISERFPGNCLWSPLRSPAASKHSESSTSTPKRCRLKK 130
>At2g39580.1 68415.m04855 expressed protein
Length = 1567
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +2
Query: 2 AAGSNSISATTKSASLKRLSATDSLAYMISSHKYIKHL*RKMSTEAQNTDAAVEQVTQEV 181
A ++S +T S + + S A + S+KYI R +S +AQ + VE + ++
Sbjct: 155 AITKKALSTSTFSHAATSKVSNLSFAKEMKSNKYIHSSERTVSKDAQRPEQIVESNSNKL 214
Query: 182 KDVK 193
+D+K
Sbjct: 215 QDLK 218
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 131 TEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKS 244
T+ Q+ ++ + QEVKDV+ + P + NG S++S
Sbjct: 693 TQEQSDSSSDTNLPQEVKDVRTDLETLPDSGNGGSNES 730
>At2g21560.1 68415.m02566 expressed protein contains weak similarity
to reticulocyte-binding protein 2 homolog A [Plasmodium
falciparum] gi|9754767|gb|AAF98066
Length = 274
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +2
Query: 119 RKMSTEAQNTDAAVEQVTQEVKDVKLENGNAPGA-SNGTSSKSEDSAYLSRKPSRRFPNL 295
R+ + ++ +Q T+E ++ KL+ G S+G S+ +D ++ K R+
Sbjct: 150 RQSRAKPSMSENRAKQSTEEKRE-KLKKSEISGRQSSGDESEKKD---ITVKKQRQIVAQ 205
Query: 296 EIPSPMEKPSRSRKATNG*SKPKSLMXRK*QQRTRP 403
SPM+ RSR + SK S + K + RP
Sbjct: 206 NQDSPMKSYERSRSENHEGSKKSSCVQLKRSETERP 241
>At1g77410.1 68414.m09015 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase SP:P45582 from
[Asparagus officinalis]
Length = 815
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 90 HHTNTLNTYKEKCLLKHRIRMPLWSK 167
H N+L ++ CL K R +P+WSK
Sbjct: 769 HSPNSLAVVQKACLKKSRCSVPVWSK 794
>At1g07540.1 68414.m00807 telomere-binding protein, putative similar
to telomere binding protein TBP1 [Nicotiana glutinosa]
gi|23664357|gb|AAN39330
Length = 622
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 194 LENGNAPGASNGTSSKSEDSAYLSRKP 274
LE GN+ +SN TS +ED + ++P
Sbjct: 55 LEGGNSSSSSNNTSGNNEDQCAVKKEP 81
>At5g36230.1 68418.m04371 eIF4-gamma/eIF5/eIF2-epsilon
domain-containing protein low similarity to SP|Q13144
Translation initiation factor eIF-2B epsilon subunit
(eIF-2B GDP-GTP exchange factor) {Homo sapiens};
contains Pfam profile PF02020:
eIF4-gamma/eIF5/eIF2-epsilon
Length = 411
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 131 TEAQNTDAAVEQVTQEVKDVKL 196
TE N D +E V Q++KD KL
Sbjct: 265 TEESNVDEVIESVKQQIKDAKL 286
>At4g16280.2 68417.m02470 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 747
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 140 QNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSE 247
Q++ A+ Q+ Q+V+ ++ N N P + NG + K +
Sbjct: 523 QSSQQAISQLQQQVQSMQQPNQNLPLSQNGRAGKQQ 558
>At4g16280.1 68417.m02469 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 505
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 140 QNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSE 247
Q++ A+ Q+ Q+V+ ++ N N P + NG + K +
Sbjct: 281 QSSQQAISQLQQQVQSMQQPNQNLPLSQNGRAGKQQ 316
>At3g22160.1 68416.m02797 VQ motif-containing protein contains
PF05678: VQ motif
Length = 192
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +2
Query: 125 MSTEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSEDSAYLSRKPSRRFPNLEIP 304
++T+ N A V+Q T + +GN A + TSS S+ SA S++ ++ N +
Sbjct: 69 LNTDTSNFRAMVQQYTGGPSAMAFGSGNTTSAFSLTSS-SDPSAGSSQQAPWQY-NFQPH 126
Query: 305 SPMEKPSR 328
+P++ P R
Sbjct: 127 APLQPPQR 134
>At3g11720.1 68416.m01437 expressed protein
Length = 542
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = +2
Query: 158 VEQVTQE--VKDVKLENGNAPGASNGTSSKSED 250
V ++ +E V D+K EN ++P +S+ +SS SED
Sbjct: 348 VPEIEEEECVDDLKEENKSSPSSSSSSSSSSED 380
>At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 883
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +2
Query: 23 SATTKSASLKRLSATDSLAYMISSHKYIKHL*RKMSTEAQNTDAAVEQVTQEVKDVKLEN 202
SA ++A +K+L + L + + + I + + +TE+ A + K KL+N
Sbjct: 102 SALQQTADVKQLLELEEL--LKDARREIDGILKSHATESPQETPAYHSEKSDEKSDKLDN 159
Query: 203 GNAPGASNGTSSKS 244
+ +SNG S +S
Sbjct: 160 HESGASSNGNSHES 173
>At1g65220.1 68414.m07394 eIF4-gamma/eIF5/eIF2-epsilon
domain-containing protein low similarity to SP|P47823
Translation initiation factor eIF-2B epsilon subunit
(eIF-2B GDP-GTP exchange factor) {Oryctolagus
cuniculus}; contains Pfam profile PF02020:
eIF4-gamma/eIF5/eIF2-epsilon
Length = 411
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 98 KYIKHL*RKMSTEAQNTDAAVEQVTQEVKDVKL 196
K IK + TE N D E V Q+VKD KL
Sbjct: 254 KEIKAVLTSQVTEEINVDEVTEMVKQQVKDAKL 286
>At1g10760.1 68414.m01231 starch excess protein (SEX1) identical to
SEX1 [Arabidopsis thaliana] GI:12044358; supporting cDNA
gi|12044357|gb|AF312027.1|AF312027
Length = 1399
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 152 AAVEQVTQEVKDVKLENGNAPGASNGTSSKS-EDSAYLSRKPSRR 283
A+VE + K +K +N N SNGTSS E+ +S++P R+
Sbjct: 256 ASVEDL--RAKLLKKDNSNESPKSNGTSSSGREEKKKVSKQPERK 298
>At3g45780.1 68416.m04953 protein kinase / nonphototropic hypocotyl
protein 1 (NPH1) / phototropin identical to SP|O48963
Nonphototropic hypocotyl protein 1 (EC 2.7.1.37)
(Phototropin) {Arabidopsis thaliana}, cDNA
nonphototropic hypocotyl 1 (NPH1) GI:2832240; contains
Pfam profiles PF00069:Protein kinase domain and
PF00785:PAC motif
Length = 996
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +2
Query: 134 EAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSEDSAYLSRKPSRRFPNLEIPSPM 313
+A+ D A VT+ V+ VK + + +S L +KP+RR +PS
Sbjct: 325 DARQKDMATNSVTELVEAVKRPRALSESTNLHPFMTKSESDELPKKPARRMSENVVPSGR 384
Query: 314 EKPSRSRK 337
R+
Sbjct: 385 RNSGGGRR 392
>At3g27260.1 68416.m03407 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 813
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 119 RKMSTEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSEDS 253
+K+S+ N+ + K V+ +NG + G + GTS K E S
Sbjct: 120 QKISSRVSNSKKPSDFAVGSGKKVRHQNGTSRGWNRGTSGKFESS 164
>At3g20490.1 68416.m02595 expressed protein
Length = 458
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +2
Query: 218 ASNGTSSKSEDSAYLSRKPSRRFPNLEIPSPMEKPSRSRKATNG*SKPKSLMXRK*QQRT 397
A++G SS + SR P RRF L+ S + PS SR + K S + +
Sbjct: 151 AASGISSVASLFQMSSRSPLRRFQLLDSDSEDDHPSTSRDLSGATKKHDSFSKNQPSIAS 210
Query: 398 RP 403
+P
Sbjct: 211 KP 212
>At2g22720.3 68415.m02692 expressed protein
Length = 569
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 182 KDVKLENGNAPGASNGTSSKSEDSAYLSRKPSRRFPNLEIPSPMEKPSRSR 334
K + NG PG S + + L RKPS + SP ++PS SR
Sbjct: 379 KQMSSSNGVGPGRSATNARPLPSKSSLERKPSISAGKSSLQSP-QRPSSSR 428
>At2g22720.2 68415.m02691 expressed protein
Length = 672
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 182 KDVKLENGNAPGASNGTSSKSEDSAYLSRKPSRRFPNLEIPSPMEKPSRSR 334
K + NG PG S + + L RKPS + SP ++PS SR
Sbjct: 482 KQMSSSNGVGPGRSATNARPLPSKSSLERKPSISAGKSSLQSP-QRPSSSR 531
>At2g22720.1 68415.m02693 expressed protein
Length = 340
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 182 KDVKLENGNAPGASNGTSSKSEDSAYLSRKPSRRFPNLEIPSPMEKPSRSR 334
K + NG PG S + + L RKPS + SP ++PS SR
Sbjct: 150 KQMSSSNGVGPGRSATNARPLPSKSSLERKPSISAGKSSLQSP-QRPSSSR 199
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +2
Query: 182 KDVKLENGNAPGASNGTSSKSEDSAYLSR-KPSRRFPNLEIPSPMEKPSRSRKATNG*SK 358
+ V G SNG SS S + S KPS+ P + PS KP + K
Sbjct: 375 RPVDCSKDKCSGGSNGGSSPSPNPPRTSEPKPSKPEPVMPKPSDSSKPETPKTPEQPSPK 434
Query: 359 PK 364
P+
Sbjct: 435 PQ 436
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/37 (29%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 252 ALIFQGSLQGVFQIWRSQVRWK-SHHALAKRQMDEAS 359
+L+F GS G ++W+ ++R K + H+L + + + S
Sbjct: 188 SLVFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQES 224
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,227,784
Number of Sequences: 28952
Number of extensions: 276287
Number of successful extensions: 840
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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