Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0102
(660 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 121 2e-26
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 121 2e-26
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 109 6e-23
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 105 1e-21
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 102 7e-21
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 101 2e-20
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 101 2e-20
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 101 2e-20
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 99 5e-20
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 100 6e-20
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 99 8e-20
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 99 1e-19
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 98 1e-19
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 93 5e-18
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 91 2e-17
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 91 3e-17
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 91 3e-17
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 90 4e-17
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 89 9e-17
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 89 1e-16
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 86 8e-16
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 85 1e-15
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 84 3e-15
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 79 7e-14
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 79 1e-13
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 79 1e-13
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 79 1e-13
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 79 1e-13
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 77 5e-13
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 73 8e-12
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 73 8e-12
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 70 6e-11
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 65 1e-09
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 62 2e-08
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 60 4e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 58 2e-07
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 55 1e-06
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 55 1e-06
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 55 1e-06
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 51 2e-05
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 47 5e-04
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 47 5e-04
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 45 0.001
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 44 0.002
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 44 0.004
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 41 0.030
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 41 0.030
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 39 0.093
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 37 0.49
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 37 0.49
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 36 1.1
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 34 3.5
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 33 6.1
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 6.1
UniRef50_Q93ZD2 Cluster: AT5g63780/MBK5_26; n=4; Magnoliophyta|R... 33 8.0
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 33 8.0
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 121 bits (291), Expect = 2e-26
Identities = 68/134 (50%), Positives = 72/134 (53%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLA
Sbjct: 91 FPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLA 150
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
GIS P G+ GAIT+LLTDR
Sbjct: 151 GISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDR 210
Query: 617 NLNTSFFDPAGGGD 658
NLNTSFFDPAGGGD
Sbjct: 211 NLNTSFFDPAGGGD 224
Score = 70.5 bits (165), Expect = 3e-11
Identities = 39/80 (48%), Positives = 42/80 (52%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 194
+DIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 10 KDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMP 69
Query: 195 XXXXXXXN*LVPLILGAPDI 254
N LVPL+LGAPD+
Sbjct: 70 IMIGGFGNWLVPLMLGAPDM 89
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 121 bits (291), Expect = 2e-26
Identities = 68/134 (50%), Positives = 72/134 (53%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLA
Sbjct: 67 FPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLA 126
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
GIS P G+ GAIT+LLTDR
Sbjct: 127 GISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDR 186
Query: 617 NLNTSFFDPAGGGD 658
NLNTSFFDPAGGGD
Sbjct: 187 NLNTSFFDPAGGGD 200
Score = 62.9 bits (146), Expect = 7e-09
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = +3
Query: 96 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 254
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDM 65
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 109 bits (262), Expect = 6e-23
Identities = 66/135 (48%), Positives = 78/135 (57%)
Frame = -1
Query: 660 GSPPPAGSKNDVFKFRSVNNIVIAPS*NR******KCCNPYSSYK*G*LINDILFNRXXX 481
GSPPPAGSK +VFKFRSV +IVIAP+ + G I +R
Sbjct: 7 GSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLI 66
Query: 480 XXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIR 301
I+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++
Sbjct: 67 TVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVK 126
Query: 300 EGGRSQNLILFIRGN 256
EGG +QNL+LFIRGN
Sbjct: 127 EGGSNQNLMLFIRGN 141
Score = 84.2 bits (199), Expect = 2e-15
Identities = 47/93 (50%), Positives = 54/93 (58%)
Frame = -3
Query: 304 KGGG*ESKSYIIYSWECISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 125
K GG + +SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 124 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 26
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 105 bits (251), Expect = 1e-21
Identities = 60/134 (44%), Positives = 66/134 (49%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLA
Sbjct: 77 FPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLA 136
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
G+S + GAIT+LLTDR
Sbjct: 137 GVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDR 196
Query: 617 NLNTSFFDPAGGGD 658
N NTSFFDPAGGGD
Sbjct: 197 NFNTSFFDPAGGGD 210
Score = 56.4 bits (130), Expect = 6e-07
Identities = 27/53 (50%), Positives = 32/53 (60%)
Frame = +3
Query: 96 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 254
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDM 75
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 102 bits (245), Expect = 7e-21
Identities = 60/134 (44%), Positives = 67/134 (50%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLA
Sbjct: 95 FPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLA 154
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
GIS P + IT+LLTDR
Sbjct: 155 GISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDR 214
Query: 617 NLNTSFFDPAGGGD 658
NLNT+FFDPAGGGD
Sbjct: 215 NLNTTFFDPAGGGD 228
Score = 65.7 bits (153), Expect = 9e-10
Identities = 35/80 (43%), Positives = 41/80 (51%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 194
+DIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 14 KDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMP 73
Query: 195 XXXXXXXN*LVPLILGAPDI 254
N LVPL++GAPD+
Sbjct: 74 IMIGGFGNWLVPLMIGAPDM 93
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 101 bits (242), Expect = 2e-20
Identities = 59/134 (44%), Positives = 65/134 (48%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+
Sbjct: 94 FPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLS 153
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
GIS P + GAIT+LLTDR
Sbjct: 154 GISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDR 213
Query: 617 NLNTSFFDPAGGGD 658
N NTSF+DPAGGGD
Sbjct: 214 NFNTSFYDPAGGGD 227
Score = 46.8 bits (106), Expect = 5e-04
Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 188
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVP+++GAPD+
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDM 92
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 101 bits (242), Expect = 2e-20
Identities = 59/134 (44%), Positives = 65/134 (48%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+
Sbjct: 94 FPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLS 153
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
GIS P + GAIT+LLTDR
Sbjct: 154 GISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDR 213
Query: 617 NLNTSFFDPAGGGD 658
N NTSF+DPAGGGD
Sbjct: 214 NFNTSFYDPAGGGD 227
Score = 46.8 bits (106), Expect = 5e-04
Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 188
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVP+++GAPD+
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDM 92
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 101 bits (241), Expect = 2e-20
Identities = 61/134 (45%), Positives = 68/134 (50%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR N+ F VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+A
Sbjct: 13 FPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMA 72
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
G+ P + GAIT+LLTDR
Sbjct: 73 GVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAGAITMLLTDR 132
Query: 617 NLNTSFFDPAGGGD 658
N+NTSFFDPAGGGD
Sbjct: 133 NINTSFFDPAGGGD 146
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 99 bits (238), Expect = 5e-20
Identities = 58/134 (43%), Positives = 66/134 (49%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLA
Sbjct: 95 FPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLA 154
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
G+S P + GAIT+LLTDR
Sbjct: 155 GLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDR 214
Query: 617 NLNTSFFDPAGGGD 658
NT+FFDPAGGGD
Sbjct: 215 YFNTTFFDPAGGGD 228
Score = 56.0 bits (129), Expect = 8e-07
Identities = 29/80 (36%), Positives = 38/80 (47%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 194
+DIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 14 KDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMP 73
Query: 195 XXXXXXXN*LVPLILGAPDI 254
N VPL++GAPD+
Sbjct: 74 TMIGGFGNWFVPLMIGAPDM 93
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 99.5 bits (237), Expect = 6e-20
Identities = 57/134 (42%), Positives = 65/134 (48%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLA
Sbjct: 94 FPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLA 153
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
G+S P + IT+LLTDR
Sbjct: 154 GVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDR 213
Query: 617 NLNTSFFDPAGGGD 658
NLNT+FFDPAGGGD
Sbjct: 214 NLNTTFFDPAGGGD 227
Score = 63.3 bits (147), Expect = 5e-09
Identities = 34/80 (42%), Positives = 40/80 (50%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 194
+DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 13 KDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 72
Query: 195 XXXXXXXN*LVPLILGAPDI 254
N LVPL++GAPD+
Sbjct: 73 ILIGGFGNWLVPLMIGAPDM 92
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 99.1 bits (236), Expect = 8e-20
Identities = 57/134 (42%), Positives = 65/134 (48%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLA
Sbjct: 94 FPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLA 153
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
G+S P + IT+LLTDR
Sbjct: 154 GVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDR 213
Query: 617 NLNTSFFDPAGGGD 658
NLNT+FFDPAGGGD
Sbjct: 214 NLNTTFFDPAGGGD 227
Score = 63.3 bits (147), Expect = 5e-09
Identities = 34/80 (42%), Positives = 40/80 (50%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 194
+DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 13 KDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 72
Query: 195 XXXXXXXN*LVPLILGAPDI 254
N LVPL++GAPD+
Sbjct: 73 VMIGGFGNWLVPLMIGAPDM 92
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 98.7 bits (235), Expect = 1e-19
Identities = 56/134 (41%), Positives = 65/134 (48%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLA
Sbjct: 94 FPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLA 153
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
G+S P + IT+LLTDR
Sbjct: 154 GVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDR 213
Query: 617 NLNTSFFDPAGGGD 658
NLNT+FFDPAGGGD
Sbjct: 214 NLNTTFFDPAGGGD 227
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/80 (41%), Positives = 40/80 (50%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 194
+DIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 13 KDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMP 72
Query: 195 XXXXXXXN*LVPLILGAPDI 254
N LVPL++GAPD+
Sbjct: 73 IMIGGFGNWLVPLMIGAPDM 92
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 98.3 bits (234), Expect = 1e-19
Identities = 56/134 (41%), Positives = 66/134 (49%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+
Sbjct: 97 FPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLS 156
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
G+S P + GAIT+LLTDR
Sbjct: 157 GVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDR 216
Query: 617 NLNTSFFDPAGGGD 658
N NT+FFDPAGGGD
Sbjct: 217 NFNTTFFDPAGGGD 230
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXX 188
+DIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 14 KDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMV 73
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N VP+++GAPD+
Sbjct: 74 MPAMIGGFGNWFVPILIGAPDM 95
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 93.1 bits (221), Expect = 5e-18
Identities = 55/134 (41%), Positives = 64/134 (47%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++
Sbjct: 102 FPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHIS 161
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
G S P + GAIT+LLTDR
Sbjct: 162 GASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDR 221
Query: 617 NLNTSFFDPAGGGD 658
N NTSFFD +GGGD
Sbjct: 222 NFNTSFFDASGGGD 235
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 188
+DIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 19 KDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMV 78
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVP+++G+PD+
Sbjct: 79 MPVMIGGFGNWLVPIMIGSPDM 100
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 91.1 bits (216), Expect = 2e-17
Identities = 56/134 (41%), Positives = 62/134 (46%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 95 FPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLT 154
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
IS P + IT+LL DR
Sbjct: 155 SISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDR 214
Query: 617 NLNTSFFDPAGGGD 658
N NTSFF+ AGGGD
Sbjct: 215 NFNTSFFEVAGGGD 228
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 90.6 bits (215), Expect = 3e-17
Identities = 55/134 (41%), Positives = 62/134 (46%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 95 FPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLT 154
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
IS P + IT+LL DR
Sbjct: 155 SISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDR 214
Query: 617 NLNTSFFDPAGGGD 658
N NTSFF+ +GGGD
Sbjct: 215 NFNTSFFEVSGGGD 228
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 90.6 bits (215), Expect = 3e-17
Identities = 55/134 (41%), Positives = 62/134 (46%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 95 FPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLT 154
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
IS P + IT+LL DR
Sbjct: 155 SISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDR 214
Query: 617 NLNTSFFDPAGGGD 658
N NTSFF+ +GGGD
Sbjct: 215 NFNTSFFEVSGGGD 228
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 90.2 bits (214), Expect = 4e-17
Identities = 53/134 (39%), Positives = 61/134 (45%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLA
Sbjct: 78 FPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLA 137
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
G S + GAIT+LLTDR
Sbjct: 138 GASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDR 197
Query: 617 NLNTSFFDPAGGGD 658
N+NTSFFDP+GGGD
Sbjct: 198 NMNTSFFDPSGGGD 211
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +3
Query: 96 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 254
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD+
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDM 76
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 89.0 bits (211), Expect = 9e-17
Identities = 53/134 (39%), Positives = 62/134 (46%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 95 FPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMT 154
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
IS P + +T+LL DR
Sbjct: 155 SISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDR 214
Query: 617 NLNTSFFDPAGGGD 658
N NTSFF+ AGGGD
Sbjct: 215 NFNTSFFEVAGGGD 228
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 88.6 bits (210), Expect = 1e-16
Identities = 52/129 (40%), Positives = 60/129 (46%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLA
Sbjct: 83 FPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLA 142
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
GIS P + IT+LLTDR
Sbjct: 143 GISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDR 202
Query: 617 NLNTSFFDP 643
NLNT+FFDP
Sbjct: 203 NLNTTFFDP 211
Score = 62.9 bits (146), Expect = 7e-09
Identities = 33/80 (41%), Positives = 40/80 (50%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 194
+DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 2 KDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 61
Query: 195 XXXXXXXN*LVPLILGAPDI 254
N L+PL++GAPD+
Sbjct: 62 IMIGGFGNWLIPLMIGAPDM 81
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 85.8 bits (203), Expect = 8e-16
Identities = 51/134 (38%), Positives = 56/134 (41%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN F E G GTG TVYPPLSS +H G SVDL IFS HL
Sbjct: 98 FPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLV 157
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
GI P + AIT+LL DR
Sbjct: 158 GIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDR 217
Query: 617 NLNTSFFDPAGGGD 658
N NTSF+DP GGGD
Sbjct: 218 NFNTSFYDPVGGGD 231
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 85.4 bits (202), Expect = 1e-15
Identities = 51/134 (38%), Positives = 61/134 (45%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+
Sbjct: 95 FPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLS 154
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
GIS + G IT++LTDR
Sbjct: 155 GISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDR 214
Query: 617 NLNTSFFDPAGGGD 658
N NTSFF+ AGGGD
Sbjct: 215 NFNTSFFEVAGGGD 228
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 NSAREDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 179
+S +DIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 9 SSNAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIF 68
Query: 180 XXXXXXXXXXXXN*LVPLILGAPDI 254
N L+PL LG PD+
Sbjct: 69 FMVMPALIGGFGNFLLPLGLGGPDM 93
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 83.8 bits (198), Expect = 3e-15
Identities = 49/134 (36%), Positives = 60/134 (44%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+
Sbjct: 121 FPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLS 180
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
GIS + AIT+LLTDR
Sbjct: 181 GISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDR 240
Query: 617 NLNTSFFDPAGGGD 658
NLNTSF++ AGGGD
Sbjct: 241 NLNTSFYELAGGGD 254
Score = 39.1 bits (87), Expect = 0.093
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 NSAREDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 179
+S +DI LY EL PG I D+Q+YN+I+T+H
Sbjct: 35 SSNAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIF 94
Query: 180 XXXXXXXXXXXXN*LVPLILGAPDI 254
N L+P+++G PD+
Sbjct: 95 FMVMPALIGGFGNFLLPILIGGPDM 119
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 79.4 bits (187), Expect = 7e-14
Identities = 44/134 (32%), Positives = 60/134 (44%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++
Sbjct: 200 FPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVS 259
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
G S P + GAIT+LLTDR
Sbjct: 260 GASSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDR 319
Query: 617 NLNTSFFDPAGGGD 658
N T+FFDPAGGGD
Sbjct: 320 NFGTTFFDPAGGGD 333
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 78.6 bits (185), Expect = 1e-13
Identities = 44/134 (32%), Positives = 61/134 (45%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
G+S P + +T+LL DR
Sbjct: 172 GLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDR 231
Query: 617 NLNTSFFDPAGGGD 658
N NTSFF +GGGD
Sbjct: 232 NFNTSFFVVSGGGD 245
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 78.6 bits (185), Expect = 1e-13
Identities = 44/134 (32%), Positives = 61/134 (45%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
G+S P + +T+LL DR
Sbjct: 172 GLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDR 231
Query: 617 NLNTSFFDPAGGGD 658
N NTSFF +GGGD
Sbjct: 232 NFNTSFFVVSGGGD 245
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 78.6 bits (185), Expect = 1e-13
Identities = 44/134 (32%), Positives = 61/134 (45%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
G+S P + +T+LL DR
Sbjct: 172 GLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDR 231
Query: 617 NLNTSFFDPAGGGD 658
N NTSFF +GGGD
Sbjct: 232 NFNTSFFVVSGGGD 245
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 78.6 bits (185), Expect = 1e-13
Identities = 44/134 (32%), Positives = 61/134 (45%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
G+S P + +T+LL DR
Sbjct: 172 GLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDR 231
Query: 617 NLNTSFFDPAGGGD 658
N NTSFF +GGGD
Sbjct: 232 NFNTSFFVVSGGGD 245
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 76.6 bits (180), Expect = 5e-13
Identities = 53/138 (38%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFS 424
FPR+NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+
Sbjct: 123 FPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFA 182
Query: 425 LHLAGISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITIL 604
LHL+G+S L++L L IT++
Sbjct: 183 LHLSGVSSLLGSINFITTVANMRTPGIK------LHKL-ALFGWATWSSRSRYFLGITMV 235
Query: 605 LTDRNLNTSFFDPAGGGD 658
LTDRN NTSFF+ AGGGD
Sbjct: 236 LTDRNFNTSFFEVAGGGD 253
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 191
+DIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 41 KDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVM 100
Query: 192 XXXXXXXXN*LVPLILGAPDI 254
N L+PL++G PD+
Sbjct: 101 PALIGGFGNFLMPLMIGGPDM 121
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 72.5 bits (170), Expect = 8e-12
Identities = 47/134 (35%), Positives = 57/134 (42%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
F R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+
Sbjct: 100 FARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLS 159
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
G S P +T+ + DR
Sbjct: 160 GFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDR 219
Query: 617 NLNTSFFDPAGGGD 658
N NTSFF+ AGGGD
Sbjct: 220 NFNTSFFEYAGGGD 233
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 72.5 bits (170), Expect = 8e-12
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+
Sbjct: 94 FPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLS 153
Query: 437 GIS 445
GIS
Sbjct: 154 GIS 156
Score = 46.8 bits (106), Expect = 5e-04
Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 188
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVP+++GAPD+
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDM 92
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 69.7 bits (163), Expect = 6e-11
Identities = 49/138 (35%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 424
FPR+NNI F V NGAGTG TVY PLS++ G +VD+AI S
Sbjct: 134 FPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILS 192
Query: 425 LHLAGISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITIL 604
LH+AG S P + AIT+L
Sbjct: 193 LHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITML 252
Query: 605 LTDRNLNTSFFDPAGGGD 658
LTDRN T+F+D AGGGD
Sbjct: 253 LTDRNFGTTFYDAAGGGD 270
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/56 (57%), Positives = 36/56 (64%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 424
FPR+NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 10 FPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/134 (27%), Positives = 51/134 (38%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F + E G G G T+YP L H + D +F++HL
Sbjct: 97 FPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLL 156
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
GIS + + G +T++L DR
Sbjct: 157 GISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDR 216
Query: 617 NLNTSFFDPAGGGD 658
N NTSF+D GGGD
Sbjct: 217 NFNTSFYDVVGGGD 230
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 60.5 bits (140), Expect = 4e-08
Identities = 42/135 (31%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Frame = +2
Query: 260 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 439
PR+NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 440 ISXXXXXXXXXXXXXXXXXXXXXXXXY-PYL-YEL*GLQXXXXXXXXXXXXGAITILLTD 613
+S P L + L G G +T+LL D
Sbjct: 157 MSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVPVLAAG-LTLLLLD 215
Query: 614 RNLNTSFFDPAGGGD 658
R+ +TSF+ P GGGD
Sbjct: 216 RHFSTSFYYPEGGGD 230
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 57.6 bits (133), Expect = 2e-07
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = +2
Query: 326 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 445
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG S
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGAS 51
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 55.2 bits (127), Expect = 1e-06
Identities = 34/80 (42%), Positives = 40/80 (50%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 194
+D GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 14 KDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMP 73
Query: 195 XXXXXXXN*LVPLILGAPDI 254
N LVPL++GAPD+
Sbjct: 74 IMIGGFGNWLVPLMIGAPDM 93
Score = 39.1 bits (87), Expect = 0.093
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 376
FPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 95 FPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 55.2 bits (127), Expect = 1e-06
Identities = 37/107 (34%), Positives = 46/107 (42%)
Frame = +2
Query: 338 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISXXXXXXXXXXXXXXXXXXXXXXXX 517
G G G T+YPPLS G VD +FSLHLAG+S
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCSIIV 275
Query: 518 YPYLYEL*GLQXXXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGD 658
+ YL+ IT+LL DRN T+FF+P+GGGD
Sbjct: 276 WAYLFT-----SVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGD 317
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/53 (49%), Positives = 31/53 (58%)
Frame = +3
Query: 96 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 254
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDM 76
Score = 33.9 bits (74), Expect = 3.5
Identities = 23/63 (36%), Positives = 28/63 (44%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F + G + PL G SVDLAIF LHLA
Sbjct: 78 FPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLA 135
Query: 437 GIS 445
G+S
Sbjct: 136 GVS 138
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +2
Query: 260 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 439
PR+ N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 440 IS 445
IS
Sbjct: 145 IS 146
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 46.8 bits (106), Expect = 5e-04
Identities = 30/83 (36%), Positives = 36/83 (43%)
Frame = +2
Query: 368 PLSSNIAHRGRSVDLAIFSLHLAGISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GL 547
PL+S+IAH G SVD+AIFSLHLAG+S P +
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 548 QXXXXXXXXXXXXGAITILLTDR 616
GAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 46.8 bits (106), Expect = 5e-04
Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 188
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVP+++GAPD+
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDM 92
Score = 32.7 bits (71), Expect = 8.0
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 385
FPR+NNI F VE GAGTG TV LS I
Sbjct: 94 FPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 45.2 bits (102), Expect = 0.001
Identities = 34/135 (25%), Positives = 51/135 (37%), Gaps = 1/135 (0%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHL 433
+PRIN+I E G GTG T+YPPLS+++ +VD+ IF L +
Sbjct: 99 YPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLV 158
Query: 434 AGISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTD 613
+G++ + G + +LL+D
Sbjct: 159 SGVASIMSSLNFITTVMHLRAKGLTLGILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSD 218
Query: 614 RNLNTSFFDPAGGGD 658
+ NT FFDP GD
Sbjct: 219 LHFNTLFFDPTFAGD 233
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 44.4 bits (100), Expect = 0.002
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXX 188
+DIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 15 KDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMV 74
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N VP+++G+PD+
Sbjct: 75 MPAMIGGFGNWFVPILIGSPDM 96
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 43.6 bits (98), Expect = 0.004
Identities = 34/134 (25%), Positives = 43/134 (32%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+N + F + G G+ T YPPLS S+D I LH
Sbjct: 105 FPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTV 163
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
GI L G++ LL DR
Sbjct: 164 GIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDR 223
Query: 617 NLNTSFFDPAGGGD 658
N NTSF+D GG+
Sbjct: 224 NFNTSFYDTKKGGN 237
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 96 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 254
EL +PG G Q+YN+++T H N ++PL+LGAP++
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEM 103
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 40.7 bits (91), Expect = 0.030
Identities = 32/106 (30%), Positives = 45/106 (42%)
Frame = +2
Query: 341 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISXXXXXXXXXXXXXXXXXXXXXXXXY 520
A G T YPPLSS SV+ ++FSLHLAGI+
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSLWYSLSL 167
Query: 521 PYLYEL*GLQXXXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGD 658
+ + + + G IT++LTD++L T F+D GGD
Sbjct: 168 -FCWSIVLVSLLLVLSLPVLAVG-ITLILTDKHLGTCFYDATMGGD 211
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 40.7 bits (91), Expect = 0.030
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
+PR+N +E G+GTG T+YPPLS+++++ G +D IF L A
Sbjct: 102 YPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAA 159
Query: 437 GIS 445
GI+
Sbjct: 160 GIA 162
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 39.1 bits (87), Expect = 0.093
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +1
Query: 259 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 429
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 36.7 bits (81), Expect = 0.49
Identities = 31/133 (23%), Positives = 43/133 (32%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+N+ F + + G Y PLSS + VD I L +
Sbjct: 113 FPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWIIGLLIM 172
Query: 437 GISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXGAITILLTDR 616
GI P + +Q A+ +LL DR
Sbjct: 173 GIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILALPALNSALAMLLIDR 232
Query: 617 NLNTSFFDPAGGG 655
L ++FFDP GG
Sbjct: 233 WLGSAFFDPTRGG 245
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 36.7 bits (81), Expect = 0.49
Identities = 34/135 (25%), Positives = 50/135 (37%), Gaps = 3/135 (2%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 433
FPR+N + + E+GA G T+Y PL++ I G +DLA ++ L
Sbjct: 102 FPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLAALAIFL 161
Query: 434 AGISXXXXXXXXXXXXXXXXXXXXXXXXYP-YLYEL*GLQXXXXXXXXXXXXGAITILLT 610
+S P + + + G +LL
Sbjct: 162 FSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILMLWAFPPLMVGG-ALLLL 220
Query: 611 DRNLNTSFF-DPAGG 652
DRNL T FF +PAGG
Sbjct: 221 DRNLGTEFFLNPAGG 235
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 587 GAITILLTDRNLNTSFFDPAGGGD 658
GA+T+L D+ L T+FF+PA GGD
Sbjct: 160 GAVTMLFLDKYLGTNFFNPAKGGD 183
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 33.9 bits (74), Expect = 3.5
Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 3/133 (2%)
Frame = +2
Query: 260 PRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSLHL 433
PR+N I F ++ +G T+YPPLS+ A G ++DL++ +H+
Sbjct: 105 PRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHV 164
Query: 434 AGISXXXXXXXXXXXXXXXXXXXXXXXXYPYLYEL*GLQXXXXXXXXXXXXG-AITILLT 610
GIS +Y + G AIT LL
Sbjct: 165 LGISSTIGSVNYITTNKYNRHVGLTFMNI-NIYNFSIIVTSILLIGSLPILGVAITGLLL 223
Query: 611 DRNLNTSFFDPAG 649
DRN+N++ +D G
Sbjct: 224 DRNINSTIYDVIG 236
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 33.1 bits (72), Expect = 6.1
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 433
FPR+N F G AG G T Y PLS+N+ G L + ++ +
Sbjct: 126 FPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFV 185
Query: 434 AGIS 445
G+S
Sbjct: 186 TGVS 189
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 33.1 bits (72), Expect = 6.1
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 11 TRRYWNIIFYFWYLIRNNWNIFKTFNS 91
++ YWNI+F+FWYLI ++ K NS
Sbjct: 345 SQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q93ZD2 Cluster: AT5g63780/MBK5_26; n=4; Magnoliophyta|Rep:
AT5g63780/MBK5_26 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 363
Score = 32.7 bits (71), Expect = 8.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 5 FGTRRYWNIIFYFWYLIRNNW 67
+G RYW I+F FW+L+ W
Sbjct: 332 YGPARYWAILFVFWFLVFGIW 352
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 32.7 bits (71), Expect = 8.0
Identities = 20/80 (25%), Positives = 32/80 (40%)
Frame = +3
Query: 15 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 194
+DIG LY EL +PG + + YN+++T+H
Sbjct: 95 KDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHG-ITMLFLFAT 153
Query: 195 XXXXXXXN*LVPLILGAPDI 254
N L+PL++GA D+
Sbjct: 154 PIIAAFSNYLIPLLIGADDM 173
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,379,167
Number of Sequences: 1657284
Number of extensions: 8104315
Number of successful extensions: 14573
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 14092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14540
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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