Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0100
         (784 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   6.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.4  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = -2

Query: 441 RVLAFFSRSIEE*FAKPGRFTVSIEK*APMAKYWIDAATSSWICFLIML 295
           RVL   +  +   F+ P  F    ++   M + WID  T  W  ++ ++
Sbjct: 162 RVLVMLAWLLSILFSLPTVFLFEEKQVQSMPQCWIDLQTWQWKVYITLV 210


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = +1

Query: 664 GXSSTNSYKGPAADFAGKX---FDPSRSXWDKHAGLGRV 771
           G ++ N   G  + F G+     D SR+   KH G GR+
Sbjct: 187 GGNNNNGTPGGHSGFWGQLGAAVDESRTPRPKHDGRGRI 225


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +2

Query: 500 SSRQGPRQHVVGERRISPRARPQAGE*RHQQHP 598
           ++++ P Q+   +  I+PR RP+A + + +  P
Sbjct: 297 AAQEIPGQNPGEKTNIAPRERPRATDHQRRNEP 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,942
Number of Sequences: 336
Number of extensions: 3161
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)