Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0100
         (784 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0040 - 304439-304482,304589-304652,304766-304831,305509-30...    30   1.8  
12_01_0039 - 319871-319914,320021-320084,320198-320263,320397-32...    29   4.2  
04_04_1078 - 30655212-30655289,30655614-30655811,30655916-306560...    29   4.2  
01_01_1154 - 9178427-9178738,9179819-9180874                           29   5.5  
05_04_0386 + 20822376-20822982,20823715-20824244,20824315-20825127     28   7.3  
02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75...    28   9.6  

>11_01_0040 -
           304439-304482,304589-304652,304766-304831,305509-305640,
           305744-305804,305885-306018,306310-306654
          Length = 281

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +1

Query: 400 ELFFDAATEEREHATKLIDYLLMRG 474
           + F +++ EER+HA KLI Y  MRG
Sbjct: 160 KFFKESSDEERDHAEKLIKYQNMRG 184


>12_01_0039 -
           319871-319914,320021-320084,320198-320263,320397-320458,
           321211-321298,321401-321461,321542-321625,322332-322630
          Length = 255

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 290 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFANY 406
           C   + +QI  E  AS  Y ++ AYF  D V   GFA +
Sbjct: 91  CEAAISEQINVEFNASYAYHSLFAYFDRDNVALKGFAKF 129



 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 400 ELFFDAATEEREHATKLIDYLLMRG 474
           + F +++ EER+HA KL+ Y  MRG
Sbjct: 128 KFFKESSDEERDHAEKLMKYQNMRG 152


>04_04_1078 -
           30655212-30655289,30655614-30655811,30655916-30656086,
           30656172-30656252,30656464-30656565,30656671-30656779,
           30656900-30656965,30657566-30657630,30658386-30658475,
           30658952-30659123,30659831-30659943,30660046-30660219,
           30660300-30660347,30662041-30662205
          Length = 543

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 540 GASALEHALKLESDVTNSIREVIKTCESSFQTTTT 644
           GAS  E   K E ++ N  +E+ +TC + +QTT T
Sbjct: 349 GASGYEETEKAE-EIMNLAKELARTCYNFYQTTPT 382


>01_01_1154 - 9178427-9178738,9179819-9180874
          Length = 455

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 514 PPPTRRGRAAHQPSSTPSSWR 576
           PPP RR +A H  SST   W+
Sbjct: 76  PPPPRRKKAGHTSSSTRPRWQ 96


>05_04_0386 + 20822376-20822982,20823715-20824244,20824315-20825127
          Length = 649

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 486 LRNRPHHVRAPANTSWESGASALEHALKLESDVTNSIR 599
           +   P  VR+PA  S   G +AL  A  +  D+T S+R
Sbjct: 172 IEQSPEVVRSPAYYSGPDGKTALHAAALVSEDMTESLR 209


>02_01_0102 -
           749122-749799,750123-750371,750753-750851,751380-751889,
           752025-753905,754093-754296,754807-754899,755036-755122,
           755241-755328,755533-755645,755943-757259,757398-758672,
           759166-759273
          Length = 2233

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +1

Query: 463 LMRG--KLTGSVTDLITSGPPPTRRGRAAHQPSST 561
           L RG  KL   V DLI SGPPP  + +    P  T
Sbjct: 460 LKRGDKKLPPEVLDLIMSGPPPDSQAQQVSGPPVT 494


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,904,995
Number of Sequences: 37544
Number of extensions: 412264
Number of successful extensions: 1276
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)