Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0100
         (784 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC065370-1|AAH65370.1|  398|Homo sapiens C20orf112 protein protein.    35   0.29 
AK128355-1|BAC87396.1|  142|Homo sapiens protein ( Homo sapiens ...    31   6.2  
AK024452-1|BAB15742.1| 1051|Homo sapiens FLJ00044 protein protein.     30   8.2  

>BC065370-1|AAH65370.1|  398|Homo sapiens C20orf112 protein protein.
          Length = 398

 Score = 35.1 bits (77), Expect = 0.29
 Identities = 24/80 (30%), Positives = 33/80 (41%)
 Frame = +1

Query: 292 LQHDEETDPGGSGRVNPVLSHGGLLLDRYGEPPRLRELFFDAATEEREHATKLIDYLLMR 471
           + H   + P  S   +PV ++GGL     G       L   A+ +   H+    D  +  
Sbjct: 313 ITHSTYSLPASSYSQDPVYANGGLNYSYRGYGALSSNLQPPASLQTGNHSNGPTDLSMKG 372

Query: 472 GKLTGSVTDLITSGPPPTRR 531
           G  T S T    SG PPTRR
Sbjct: 373 GASTTSTTPSALSGEPPTRR 392


>AK128355-1|BAC87396.1|  142|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46498 fis, clone THYMU3029318. ).
          Length = 142

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 283 LHGEPLIPDGTGLT*HCVAVAGARAATS 200
           L G+P +PD TGL   CV  +GA   T+
Sbjct: 51  LAGDPTLPDDTGLEAGCVVASGAPVVTA 78


>AK024452-1|BAB15742.1| 1051|Homo sapiens FLJ00044 protein protein.
          Length = 1051

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = +2

Query: 281 EQTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFANYSSMLRLKNAS 436
           +  C+++  +QIQE+V    Q L+ G Y+      R  F+    MLR+++++
Sbjct: 312 DANCWHLDEEQIQEQVK---QLLSNGGYYGASQQLRSMFSKVREMLRMRDSN 360


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,139,873
Number of Sequences: 237096
Number of extensions: 2127765
Number of successful extensions: 5730
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5720
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)