Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0100
         (784 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ...    32   0.40 
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ...    32   0.40 
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ...    32   0.40 
Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical pr...    32   0.53 
AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin prot...    30   1.6  
AF000261-10|AAB52930.1|  639|Caenorhabditis elegans Hypothetical...    29   2.8  
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ...    29   5.0  
AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ...    28   6.6  

>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
           protein ZK250.9 protein.
          Length = 1466

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +2

Query: 275 TMEQTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFANYSSMLR 421
           +M   C N   +  Q EV++S  ++ M  YF + T  +  F+NY   LR
Sbjct: 131 SMRCVCKNCNARFFQGEVSSSNDHINMCCYFGLTTTLQDRFSNYPDELR 179


>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
           protein Y16E11A.2 protein.
          Length = 1466

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +2

Query: 275 TMEQTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFANYSSMLR 421
           +M   C N   +  Q EV++S  ++ M  YF + T  +  F+NY   LR
Sbjct: 131 SMRCVCKNCNARFFQGEVSSSNDHINMCCYFGLTTTLQDRFSNYPDELR 179


>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
           protein F59H6.5 protein.
          Length = 1486

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +2

Query: 275 TMEQTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFANYSSMLR 421
           +M   C N   +  Q EV++S  ++ M  YF + T  +  F+NY   LR
Sbjct: 131 SMRCVCKNCNARFFQGEVSSSNDHINMCCYFGLTTTLQDRFSNYPDELR 179


>Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical
           protein F58G11.2 protein.
          Length = 960

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +2

Query: 500 SSRQGPRQHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLSNDY 640
           +S+  PR H  G+ R S  A  +  + R+  H GGH   R Q S  Y
Sbjct: 204 NSQSSPRSHQGGQDRYS--APKEDNQRRYDNHQGGHDSYRGQNSGGY 248


>AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin protein
           2 protein.
          Length = 170

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 302 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFANY 406
           + KQI  E+ AS  YL+M  YF  D V  P  A +
Sbjct: 16  VNKQINIELYASYVYLSMSFYFDRDDVALPNIAKF 50



 Score = 28.7 bits (61), Expect = 5.0
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 388 PRLRELFFDAATEEREHATKLIDYLLMRG 474
           P + + F + + EEREHAT+L+    +RG
Sbjct: 45  PNIAKFFKEQSDEEREHATELMRVQNLRG 73


>AF000261-10|AAB52930.1|  639|Caenorhabditis elegans Hypothetical
           protein F19B10.10 protein.
          Length = 639

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = -3

Query: 161 SYNHRFFDDIQKNMCS*KQ*LYKSSLY 81
           SYNHRFF  I K++ S K+ LYK+ ++
Sbjct: 99  SYNHRFF--IHKDISSDKKFLYKNDIF 123


>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
           protein Y46B2A.2 protein.
          Length = 1365

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 275 TMEQTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFANYSSMLR 421
           +M   C N   +  Q EV++S  ++ M   F + T  +  F+NY   LR
Sbjct: 41  SMRCVCKNCNARFFQGEVSSSNDHINMCCNFGLTTTLQDRFSNYPDELR 89


>AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
           protein F33H12.6 protein.
          Length = 1360

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 278 MEQTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFANYSSMLR 421
           M   C N   +  Q EV++S  ++ M   F + T  +  F+NY   LR
Sbjct: 26  MRCVCKNCNARFFQGEVSSSNDHINMCCNFGLTTTLQDRFSNYPDELR 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,771,050
Number of Sequences: 27780
Number of extensions: 313238
Number of successful extensions: 920
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)