Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0100
         (784 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    28   0.085
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         24   1.4  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    24   1.4  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    24   1.4  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   4.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   7.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.8  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 0.085
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 507 VRAPANTSWESGASALEHALKLESDVTNSI 596
           +R P   SW S  + +  A KL+ ++ NSI
Sbjct: 148 IRTPTEASWHSPEAHISVAQKLQKEIPNSI 177


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 607 MTSRMLLVTSLSSLRACSRADAPLSHDVLAGALT**GRLRSLS 479
           M S  LL   L++ +   + + P  HDV   A T  GRL SL+
Sbjct: 149 MCSPKLLTFDLTTSQLLKQVEIP--HDVAVNATTGKGRLSSLA 189


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 607 MTSRMLLVTSLSSLRACSRADAPLSHDVLAGALT**GRLRSLS 479
           M S  LL   L++ +   + + P  HDV   A T  GRL SL+
Sbjct: 149 MCSPKLLTFDLTTSQLLKQVEIP--HDVAVNATTGKGRLSSLA 189


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 607 MTSRMLLVTSLSSLRACSRADAPLSHDVLAGALT**GRLRSLS 479
           M S  LL   L++ +   + + P  HDV   A T  GRL SL+
Sbjct: 149 MCSPKLLTFDLTTSQLLKQVEIP--HDVAVNATTGKGRLSSLA 189


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 650 GLLVRGIPRRTVTRGQRRTSPAKXSTPQEVXGTSTPA 760
           G+ V G    +V  G    +  K  TP+ + GTST A
Sbjct: 12  GVGVVGGTIASVVAGAASLTLVKAETPEHLAGTSTTA 48


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
 Frame = +2

Query: 581 RHQQHPGGHQDLREQLSNDYHLVGLLVRGIPR--RTVTRGQRRTSPAKXST 727
           + QQ     Q  ++Q S+DY +VG      PR           TSP   S+
Sbjct: 797 QQQQQQQQQQQQQQQSSSDYLMVGNSPASSPRYLSAAATSSTSTSPRPASS 847


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +3

Query: 18  ANRTYLFEFPANYKSPSTPVCVKA 89
           A RTYLF+   N      P  V A
Sbjct: 545 AGRTYLFDLDYNESEEQCPYTVDA 568


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 505 TSGPPPTRRGRAAHQPS 555
           TS  PP +   AA QPS
Sbjct: 525 TSSSPPAKGAAAAGQPS 541


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,576
Number of Sequences: 438
Number of extensions: 3489
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)