Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0099
         (772 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    26   0.34 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   1.4  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   5.5  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   5.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   5.5  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   5.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   5.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.6  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +1

Query: 4   IRHESLNRSQHDAALPSTTPRQERKSST 87
           I+  ++N+ Q   +   TTP++ERK++T
Sbjct: 772 IKPANVNKEQSPNSTKETTPKKERKTAT 799


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 5   FGTRVSTDRSTTLLYRAQHPARNGSRLQTIPSPD 106
           FG+R   +R T  ++R +    NGS   +  SP+
Sbjct: 294 FGSRFDEERLTLRIHRGRGSVHNGSNNGSPRSPE 327


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 389 ALGRAAGGAKLPSAGLCLNASKAEASL 309
           ALGR AGG    S+ L L+ +   +SL
Sbjct: 5   ALGRCAGGGGRLSSVLSLSLTSLASSL 31


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 389 ALGRAAGGAKLPSAGLCLNASKAEASL 309
           ALGR AGG    S+ L L+ +   +SL
Sbjct: 5   ALGRCAGGGGRLSSVLSLSLTSLASSL 31


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 389 ALGRAAGGAKLPSAGLCLNASKAEASL 309
           ALGR AGG    S+ L L+ +   +SL
Sbjct: 5   ALGRCAGGGGRLSSVLSLSLTSLASSL 31


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 389 ALGRAAGGAKLPSAGLCLNASKAEASL 309
           ALGR AGG    S+ L L+ +   +SL
Sbjct: 5   ALGRCAGGGGRLSSVLSLSLTSLASSL 31


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 363 RTTGRSAECMNQMSETAVPLVLSS 434
           +  G+  +C N MSE  V ++L +
Sbjct: 170 KENGKEFDCHNYMSELTVDILLET 193


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 14  RVSTDRSTTLLYRAQHPARNGSRLQTIPSP 103
           +VS DR++ + YR  +PA     +Q+ PSP
Sbjct: 415 QVSPDRTSPMEYRLYNPA----LIQSQPSP 440


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 9   ARESQQIAARRCSTEHNTPPGT 74
           A  S Q + +R STE   P GT
Sbjct: 531 AIRSGQTSVQRASTEFGIPTGT 552


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,730
Number of Sequences: 438
Number of extensions: 4936
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)